RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 GLT6D1Q7Z4J2 308 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 CCDC116Q8IYX3 515 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 GPRC5AQ8NFJ5 357 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PSMG2Q969U7 264 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SLAMF9Q96A28 289 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 MEGF10Q96KG7 1140 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SOX7Q9BT81 388 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 WDR13Q9H1Z4 485 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 ABCG8Q9H221 673 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 DZANK1Q9NVP4 752 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SPG21Q9NZD8 308 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 KLHL9Q9P2J3 617 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 HS3ST4Q9Y661 456 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 RNF222A6NCQ9 220 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 FAM86C2PA6NEL3 165 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 MOCS2O96007 188 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 HIST1H1BP16401 226 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 GSTM3P21266 225 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 DGKAP23743 735 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 MRPS10P82664 201 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 DCAF12L2Q5VW00 463 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 C18orf63Q68DL7 685 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 HEPHL1Q6MZM0 1159 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 CXorf57Q6NSI4 855 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 C1orf94Q6P1W5 598 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PRSS45Q7RTY3 260 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 CTU1Q7Z7A3 348 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 C1QL4Q86Z23 238 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 ZNF383Q8NA42 475 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 OR5J2Q8NH18 312 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 GPBAR1Q8TDU6 330 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PIGKQ92643 395 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 WNT2BQ93097 391 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 BHLHE41Q9C0J9 482 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 GPBP1L1Q9HC44 474 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 TMEM30AQ9NV96 361 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 ASF1BQ9NVP2 202 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 C2orf42Q9NWW7 574 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 HELZP42694 1942 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 A0A1W2PRQ8 180 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 IQCF5A8MTL0 148 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 E7EQ34 232 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 GOSR2O14653 212 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 EMC8O43402 210 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 OR2T1O43869 369 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 F12P00748 615 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 RD3LP0DJH9 198 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TIMP2P16035 220 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 LPOP22079 712 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 PCP4P48539 62 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 LUMP51884 338 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 CASP6P55212 293 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SORDQ00796 357 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 HGFACQ04756 655 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 FOXO1Q12778 655 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PPA1Q15181 289 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 IRF4Q15306 451 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 HENMT1Q5T8I9 393 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 AADACL4Q5VUY2 407 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 FRG2Q64ET8 278 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 CDC73Q6P1J9 531 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 ZNF852Q6ZMS4 543 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 GAREM2Q75VX8 874 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 ZNF546Q86UE3 836 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TMEM200AQ86VY9 491 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 ECHDC3Q96DC8 303 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 RAB3CQ96E17 227 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SMARCD1Q96GM5 515 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 MARS2Q96GW9 593 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 RHOVQ96L33 236 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 FRG2BQ96QU4 278 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 ELF4Q99607 663 aaPredicted RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 NRIP2Q9BQI9 281 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 WRAP53Q9BUR4 548 aaKnown RBP9.03□□□□□ -0.96
VPS8-225ENST00000492449 WNT5BQ9H1J7 359 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 SEC61A2Q9H9S3 476 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TMEM161AQ9NX61 479 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 TNFSF18Q9UNG2 199 aa9.03□□□□□ -0.96
VPS8-225ENST00000492449 PLPP2O43688 288 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 SH3BGRLO75368 114 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 GJB3O75712 270 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 MMP10P09238 476 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 MMP11P24347 488 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 DDTP30046 118 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 PKIAP61925 76 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 ZNF791Q3KP31 576 aaPredicted RBP9.02□□□□□ -0.97
VPS8-225ENST00000492449 ZCCHC12Q6PEW1 402 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 CXXC5Q7LFL8 322 aaKnown RBP9.02□□□□□ -0.97
VPS8-225ENST00000492449 MTMR14Q8NCE2 650 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 SDR9C7Q8NEX9 313 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 OR4A4PQ8NGN8 299 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 SLC7A13Q8TCU3 470 aa9.02□□□□□ -0.97
VPS8-225ENST00000492449 BRIX1Q8TDN6 353 aaKnown RBP9.02□□□□□ -0.97
VPS8-225ENST00000492449 NAA11Q9BSU3 229 aaPredicted RBP9.02□□□□□ -0.97
VPS8-225ENST00000492449 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
VPS8-225ENST00000492449 MRPL37Q9BZE1 423 aaKnown RBP9.02□□□□□ -0.97
VPS8-225ENST00000492449 CHST5Q9GZS9 411 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms