RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 RIPPLY3P57055 190 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 ADAM8P78325 824 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 FUT5Q11128 374 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 SKP2Q13309 424 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 QPRTQ15274 297 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 MAPK14Q16539 360 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 ZNF239Q16600 458 aaKnown RBP16.07■□□□□ 0.16
HMGN1-219ENST00000491183 FAM174BQ3ZCQ3 159 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 AP1ARQ63HQ0 302 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 TNFAIP8L2Q6P589 184 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-219ENST00000491183 STAC2Q6ZMT1 411 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 ATP6V1C2Q8NEY4 427 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 VPS37AQ8NEZ2 397 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 TOR1AIP2Q8NFQ8 470 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 ZC3HAV1LQ96H79 300 aaKnown RBP16.07■□□□□ 0.16
HMGN1-219ENST00000491183 THUMPD3Q9BV44 507 aaKnown RBP16.07■□□□□ 0.16
HMGN1-219ENST00000491183 LAT2Q9GZY6 243 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 WDR55Q9H6Y2 383 aaPredicted RBP16.07■□□□□ 0.16
HMGN1-219ENST00000491183 COQ10BQ9H8M1 238 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 AIG1Q9NVV5 245 aa16.07■□□□□ 0.16
HMGN1-219ENST00000491183 PRAMEF27A3QJZ7 478 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 C9JVG2 144 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 E9PBE3 544 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 SNNO75324 88 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-219ENST00000491183 THBDP07204 575 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 LOXP28300 417 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-219ENST00000491183 AGTR1P30556 359 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 CLNS1AP54105 237 aaKnown RBP16.06■□□□□ 0.16
HMGN1-219ENST00000491183 DPY19L1Q2PZI1 675 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 GTF2IRD2BQ6EKJ0 949 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 TYW3Q6IPR3 259 aaKnown RBP16.06■□□□□ 0.16
HMGN1-219ENST00000491183 C16orf62Q7Z3J2 963 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 GTF2IRD2Q86UP8 949 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 MGARPQ8TDB4 240 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 RNF128Q8TEB7 428 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 ABHD3Q8WU67 409 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 CPNE4Q96A23 557 aaPredicted RBP16.06■□□□□ 0.16
HMGN1-219ENST00000491183 ZG16BQ96DA0 208 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 NEURL3Q96EH8 262 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 PIK3IP1Q96FE7 263 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 CCDC115Q96NT0 180 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 HS3ST6Q96QI5 342 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 SAP130Q9H0E3 1048 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 EXD2Q9NVH0 621 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 THAP1Q9NVV9 213 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 GPR45Q9Y5Y3 372 aa16.06■□□□□ 0.16
HMGN1-219ENST00000491183 ZNF469Q96JG9 3925 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-219ENST00000491183 GOLGA8QA0A0J9YX86 632 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 GOLGA8OA6NCC3 632 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 GJE1A6NN92 205 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 GOLGA8NF8WBI6 632 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 BCAS1O75363 584 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-219ENST00000491183 AGR2O95994 175 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 CSTAP01040 98 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 GUSBP08236 651 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 EPHA3P29320 983 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 CCR4P51679 360 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 SLC18A1P54219 525 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 FOXD4Q12950 439 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-219ENST00000491183 CBFBQ13951 182 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 NUFIP2Q7Z417 695 aaKnown RBP16.05■□□□□ 0.16
HMGN1-219ENST00000491183 SPATA19Q7Z5L4 167 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 ZFP90Q8TF47 636 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 ROPN1LQ96C74 230 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 SLC35A5Q9BS91 424 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 INPP5KQ9BT40 448 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 QRSL1Q9H0R6 528 aaKnown RBP16.05■□□□□ 0.16
HMGN1-219ENST00000491183 C12orf49Q9H741 205 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 TIGARQ9NQ88 270 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 MARCOQ9UEW3 520 aaPredicted RBP16.05■□□□□ 0.16
HMGN1-219ENST00000491183 BTNL2Q9UIR0 455 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 WDR45Q9Y484 360 aa16.05■□□□□ 0.16
HMGN1-219ENST00000491183 UQCRHLA0A096LP55 91 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 A0A1W2PNR3 127 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 HDAC3O15379 428 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 KLF4O43474 513 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 KIAA0513O60268 411 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 CYP7B1O75881 506 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 PABPC4LP0CB38 370 aaKnown RBP16.04■□□□□ 0.16
HMGN1-219ENST00000491183 UBTFL6P0CB48 400 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-219ENST00000491183 KITP10721 976 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 ENPP1P22413 925 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 PGM1P36871 562 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 SESN3P58005 492 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 MAGOHP61326 146 aaKnown RBP16.04■□□□□ 0.16
HMGN1-219ENST00000491183 SELENBP1Q13228 472 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 TIGD2Q4W5G0 525 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 ATAD3BQ5T9A4 648 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 FRRS1Q6ZNA5 592 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 BEND4Q6ZU67 534 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 HMGN2P46Q86SG4 172 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 CXorf67Q86X51 503 aaPredicted RBP16.04■□□□□ 0.16
HMGN1-219ENST00000491183 TUSC5Q8IXB3 177 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 TLCD1Q96CP7 247 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 TMBIM4Q9HC24 238 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 FREM1Q5H8C1 2179 aa16.04■□□□□ 0.16
HMGN1-219ENST00000491183 PRR14LQ5THK1 2151 aa16.03■□□□□ 0.16
HMGN1-219ENST00000491183 MAP1AP78559 2803 aaPredicted RBP16.03■□□□□ 0.16
HMGN1-219ENST00000491183 IGHV3-15A0A0B4J1V0 119 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms