RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ATP5A1P25705 553 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 PTGER1P34995 402 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 LASP1Q14847 261 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ACSM3Q53FZ2 586 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 FAM69AQ5T7M9 428 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 BAIAP2L2Q6UXY1 529 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ADCK2Q7Z695 626 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 IZUMO1Q8IYV9 350 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ANKRD53Q8N9V6 530 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 CNOT9Q92600 299 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 RGMAQ96B86 450 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 UBQLN3Q9H347 655 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 MCCC2Q9HCC0 563 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 NANSQ9NR45 359 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 CA10Q9NS85 328 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 NFKBIL1Q9UBC1 381 aaPredicted RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 SLC25A13Q9UJS0 675 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 MCRIP1C9JLW8 97 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 CTDSPLO15194 276 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 B3GALNT1O75752 331 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ACVR1BP36896 505 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 CCR9P51686 369 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 GPM6BQ13491 265 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 DECR1Q16698 335 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 TMEM255AQ5JRV8 349 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 SHEQ5VZ18 495 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ALKAL2Q6UX46 152 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 NUDT13Q86X67 352 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ZNF764Q96H86 408 aaPredicted RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 SMAD5Q99717 465 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 SEC22CQ9BRL7 303 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ORAI3Q9BRQ5 295 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 ZCCHC2Q9C0B9 1178 aaKnown RBP17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 RHBGQ9H310 441 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 RCE1Q9Y256 329 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 CA5BQ9Y2D0 317 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 NTNG1Q9Y2I2 539 aa17.97■□□□□ 0.47
SNAPC3-206ENST00000490969 TCRBV16S1A1N1A0A5B0 115 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 GIPP09681 153 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 SIM1P81133 766 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 HTR4Q13639 388 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 STK11Q15831 433 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 TRMT11Q7Z4G4 463 aaKnown RBP17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 VRK2Q86Y07 508 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 SLC44A3Q8N4M1 653 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 SPICQ8N5J4 248 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 BVESQ8NE79 360 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 VN1R2Q8NFZ6 395 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 PGLYRP3Q96LB9 341 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 IFT27Q9BW83 186 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 HRASLSQ9HDD0 168 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 ZMIZ1Q9ULJ6 1067 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 PLAGL1Q9UM63 463 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 KCNE3Q9Y6H6 103 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 PDCD5O14737 125 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 MID1O15344 667 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 REM1O75628 298 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 EPXP11678 715 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 NCBP2P52298 156 aaKnown RBP eCLIP17.96■□□□□ 0.472e-19■□□□□ 8.9
SNAPC3-206ENST00000490969 LCTLQ6UWM7 567 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 RPTNQ6XPR3 784 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 SYT9Q86SS6 491 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 OR13C5Q8NGS8 318 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 OR2A12Q8NGT7 310 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 SCARB1Q8WTV0 552 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 ZG16BQ96DA0 208 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 ZNF416Q9BWM5 594 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 TTYH1Q9H313 450 aaPredicted RBP17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 WNT6Q9Y6F9 365 aa17.96■□□□□ 0.47
SNAPC3-206ENST00000490969 PRR23D1E9PI22 279 aaPredicted RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 CDC42EP2O14613 210 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 ARPC1BO15143 372 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 HMGN2P05204 90 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 PRR23D2P0DMB1 279 aaPredicted RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 RAD52P43351 418 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 HLXQ14774 488 aaPredicted RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC25A25Q6KCM7 469 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 MBOAT2Q6ZWT7 520 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 TEX19Q8NA77 164 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 TMEM255BQ8WV15 326 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 RSPRY1Q96DX4 576 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 PELOQ9BRX2 385 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 HCAR1Q9BXC0 346 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 TMPRSS13Q9BYE2 586 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 NEDD8-MDP1E9PL57 170 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 TEX46H3BTG2 121 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 PTNP21246 168 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 ANXA11P50995 505 aaKnown RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 TAS2R43P59537 309 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 RAP2BP61225 183 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 MAPK14Q16539 360 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 AMER3Q8N944 861 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 KISS1RQ969F8 398 aaPredicted RBP17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 C4orf36Q96KX1 117 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 SLC6A15Q9H2J7 730 aa17.95■□□□□ 0.46
SNAPC3-206ENST00000490969 C2orf16Q68DN1 1984 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 CXorf51AA0A1B0GTR3 108 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 J3QLW9 94 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 AIPO00170 330 aa17.94■□□□□ 0.46
SNAPC3-206ENST00000490969 GALR3O60755 368 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms