RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 FAF2Q96CS3 445 aa3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 LRRC39Q96DD0 335 aa3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 MAGEB18Q96M61 343 aa3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 WRAP53Q9BUR4 548 aaKnown RBP3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 CENPJQ9HC77 1338 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 KLHL21Q9UJP4 597 aa3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 CELA1Q9UNI1 258 aa3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 MRPS33Q9Y291 106 aaKnown RBP3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 ZNF256Q9Y2P7 627 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 KIF25-AS1Q9Y6Z4 181 aa3.57□□□□□ -1.84
HMGB1P38-201ENST00000490557 A0A0U1RQV5 110 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 TTC26A0AVF1 554 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 FRG2CA6NGY1 282 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 E7ENQ6 273 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 H3BTX0 84 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 DNAJB6O75190 326 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 SNNO75324 88 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 CTAG2O75638 210 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 NOL4O94818 638 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 YEATS4O95619 227 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 CCDC172P0C7W6 258 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 TSPAN8P19075 237 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 IL2RGP31785 369 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 PRDX2P32119 198 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 ADRA1AP35348 466 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 SYKP43405 635 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 POU3F4P49335 361 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 CEBPDP49716 269 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 EMDP50402 254 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 RPL23AP62750 156 aaKnown RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 MRPS6P82932 125 aaKnown RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 NDPQ00604 133 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 IL18Q14116 193 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 GLYR1Q49A26 553 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 BCL7AQ4VC05 210 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 TTC19Q6DKK2 380 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 NET1Q7Z628 596 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 BIVMQ86UB2 503 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 UBQLNLQ8IYU4 475 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 SLC41A3Q96GZ6 507 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 ELMO2Q96JJ3 720 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 IQCGQ9H095 443 aaKnown RBP3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 GLT8D2Q9H1C3 349 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 IKZF5Q9H5V7 419 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 FN3KRPQ9HA64 309 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 RDH8Q9NYR8 311 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 MBD2Q9UBB5 411 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 FLVCR1Q9Y5Y0 555 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 ATRXP46100 2492 aa3.56□□□□□ -1.84
HMGB1P38-201ENST00000490557 FAM240BA0A1B0GVZ2 78 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 PCP4L1A6NKN8 68 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 OR52A4PA6NMU1 304 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 OTCP00480 354 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 PGK1P00558 417 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 CA3P07451 260 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 GCFC2P16383 781 aaKnown RBP3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 NF2P35240 595 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 DLSTP36957 453 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 HTR5AP47898 357 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 AP3M2P53677 418 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 CBX1P83916 185 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 ZP4Q12836 540 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 RFTN1Q14699 578 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 ZSWIM7Q19AV6 140 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 METTL11BQ5VVY1 283 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 CARD17Q5XLA6 110 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 LRRC8BQ6P9F7 803 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 BLOC1S2Q6QNY1 142 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 PAQR9Q6ZVX9 377 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 CENPQQ7L2Z9 268 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 SPATA24Q86W54 205 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 FBXO16Q8IX29 292 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 GCNT2Q8N0V5 402 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 OR13F1Q8NGS4 319 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 LILRB4Q8NHJ6 448 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 SLC2A14Q8TDB8 520 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 ART4Q93070 314 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 PHYHIPLQ96FC7 376 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 C4orf36Q96KX1 117 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 TSSK1BQ9BXA7 367 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 LZTFL1Q9NQ48 299 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 UBAP1Q9NZ09 502 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 SPATA7Q9P0W8 599 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 RNF14Q9UBS8 474 aa3.55□□□□□ -1.84
HMGB1P38-201ENST00000490557 ZNF646O15015 1829 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 A0A1B0GTQ1 180 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 FBLL1A6NHQ2 334 aaKnown RBP3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 ZNF879B4DU55 563 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 ALOX15BO15296 676 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 PPIHO43447 177 aaKnown RBP3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 TOXO94900 526 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 OR4F21O95013 312 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 KRT14P02533 472 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 GSTT2P0CG29 244 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 GSTT2BP0CG30 244 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 SLC2A3P11169 496 aa3.54□□□□□ -1.84
HMGB1P38-201ENST00000490557 NEFHP12036 1026 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms