RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PPP1R7Q15435 360 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 CD226Q15762 336 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 ADRM1Q16186 407 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 PRSS53Q2L4Q9 553 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 TSNAXIP1Q2TAA8 658 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 CMC1Q7Z7K0 106 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 ZAR1Q86SH2 424 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 SAMD14Q8IZD0 417 aaPredicted RBP11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 SIGLECL1Q8N7X8 197 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 RNF217Q8TC41 542 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 ATP6V1E2Q96A05 226 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 RACGAP1Q9H0H5 632 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 NTN4Q9HB63 628 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 MALT1Q9UDY8 824 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 ZDHHC2Q9UIJ5 367 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 NOSIPQ9Y314 301 aaKnown RBP11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 CORINQ9Y5Q5 1042 aa11.85□□□□□ -0.51
EXOSC3-207ENST00000490516 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 DNAJC9-AS1A6NH13 148 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 hCG_2039718K7EN88 272 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 KLF11O14901 512 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 OIP5O43482 229 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 PDYNP01213 254 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 TFP02787 698 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 SAGP10523 405 aaPredicted RBP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 MDKP21741 143 aaPredicted RBP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 PRTN3P24158 256 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 GCH1P30793 250 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 GP5P40197 560 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 RNF144AP50876 292 aaPredicted RBP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 CCNG1P51959 295 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 ALDH18A1P54886 795 aaKnown RBP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 ZNF117Q03924 483 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 TOMM34Q15785 309 aaPredicted RBP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 ZNF524Q96C55 264 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 LRRC58Q96CX6 371 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 BBS4Q96RK4 519 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 DOK1Q99704 481 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 RBBP8Q99708 897 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 C3orf14Q9HBI5 128 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 HHATLQ9HCP6 504 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 DDX18Q9NVP1 670 aaKnown RBP11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 ICAM5Q9UMF0 924 aa11.84□□□□□ -0.51
EXOSC3-207ENST00000490516 SYCE1LA8MT33 242 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 KIF2AO00139 706 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 PDLIM1O00151 329 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 PRSS23O95084 383 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 NUDT14O95848 222 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 NGFRP08138 427 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 SLC1A3P43003 542 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 GPR6P46095 362 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 NCBP2P52298 156 aaKnown RBP eCLIP11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 PRPS1P60891 318 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 LMO4P61968 165 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 TRAF3Q13114 568 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 CBLN3Q6UW01 205 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 RAPH1Q70E73 1250 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 OR2L13Q8N349 312 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 C17orf78Q8N4C9 275 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 ZNF527Q8NB42 609 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 FBXO36Q8NEA4 188 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 NANPQ8TBE9 248 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 GPR151Q8TDV0 419 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 LRRC39Q96DD0 335 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 C1orf147Q96MC9 270 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 OR5B2Q96R09 309 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 CCT8L2Q96SF2 557 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 KCNS3Q9BQ31 491 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 MMP27Q9H306 513 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 TPK1Q9H3S4 243 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 ELOVL6Q9H5J4 265 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 EQTNQ9NQ60 294 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 EMC3Q9P0I2 261 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 FBXO9Q9UK97 447 aaPredicted RBP11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 ARHGAP32A7KAX9 2087 aa11.83□□□□□ -0.52
EXOSC3-207ENST00000490516 IGKV3D-15A0A087WSY6 115 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 TMEM129A0AVI4 362 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 ZNF716A6NP11 495 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 MYO1GB0I1T2 1018 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 H6PDO95479 791 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 ADRA2AP08913 450 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 FPR2P25090 351 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 IVDP26440 423 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 ZP4Q12836 540 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 ABLIM2Q6H8Q1 611 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 LEG1Q6P5S2 330 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 IKBIPQ70UQ0 350 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 MISPQ8IVT2 679 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 GRK7Q8WTQ7 553 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 DVL3Q92997 716 aaPredicted RBP11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 NSUN5Q96P11 429 aaKnown RBP11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 SLC38A2Q96QD8 506 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 DYNLRB1Q9NP97 96 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 SLC52A3Q9NQ40 469 aa11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 GPC6Q9Y625 555 aaPredicted RBP11.82□□□□□ -0.52
EXOSC3-207ENST00000490516 MRPL33O75394 65 aaKnown RBP11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 WNT11O96014 354 aa11.81□□□□□ -0.52
EXOSC3-207ENST00000490516 CRYAAP02489 173 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms