RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 TP53I11O14683 189 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 RPSAP08865 295 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 GNAO1P09471 354 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 MYF6P23409 242 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 POLR2IP36954 125 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 LSM11P83369 360 aaKnown RBP eCLIP19.78■□□□□ 0.767e-97■■■■■ 245.7
SMC4-221ENST00000489573 SWT1Q5T5J6 900 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 WBP2NLQ6ICG8 309 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 JMJD6Q6NYC1 403 aaPredicted RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 C1orf94Q6P1W5 598 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 ULK3Q6PHR2 472 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 WDR88Q6ZMY6 472 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 MBOAT2Q6ZWT7 520 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 ZER1Q7Z7L7 766 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 BRIX1Q8TDN6 353 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 DNAJA4Q8WW22 397 aaPredicted RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 MPP4Q96JB8 637 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 UCK2Q9BZX2 261 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 KLRF1Q9NZS2 232 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 ICAM5Q9UMF0 924 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 LOC100130705A0A1B0GUX0 176 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 SLC16A6O15403 523 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 CLIC3O95833 236 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 ID4P47928 161 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 IDH2P48735 452 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 RPP38P78345 283 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 NPRL3Q12980 569 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 DCAF10Q5QP82 559 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 KLHL17Q6TDP4 642 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 IL20RBQ6UXL0 311 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 VASH2Q86V25 355 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 TMEM156Q8N614 296 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 SIRT6Q8N6T7 355 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 OR5W2Q8NH69 310 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 GNPDA2Q8TDQ7 276 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 TMEM239Q8WW34 195 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 THOC3Q96J01 351 aaKnown RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 HS6ST2Q96MM7 605 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 NR1H4Q96RI1 486 aaPredicted RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 GRIP2Q9C0E4 1043 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 METTL7AQ9H8H3 244 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 KRCC1Q9NPI7 259 aaPredicted RBP19.78■□□□□ 0.76
SMC4-221ENST00000489573 WDR70Q9NW82 654 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 UBAP1Q9NZ09 502 aa19.78■□□□□ 0.76
SMC4-221ENST00000489573 C17orf51A8MQB3 221 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 BCKDKO14874 412 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 ITPKBP27987 946 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 RBM34P42696 430 aaKnown RBP19.77■□□□□ 0.76
SMC4-221ENST00000489573 P2RX1P51575 399 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 GAS1P54826 345 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 C17orf67Q0P5P2 114 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 KRT80Q6KB66 452 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 PRICKLE2Q7Z3G6 844 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 NRMQ8IXM6 262 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 RNF113BQ8IZP6 322 aaKnown RBP19.77■□□□□ 0.76
SMC4-221ENST00000489573 B4GALNT2Q8NHY0 566 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 DUSP19Q8WTR2 217 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 C3orf49Q96BT1 292 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 FER1L6-AS2Q96M78 137 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 SECISBP2Q96T21 854 aaKnown RBP19.77■□□□□ 0.76
SMC4-221ENST00000489573 GALNT9Q9HCQ5 603 aa19.77■□□□□ 0.76
SMC4-221ENST00000489573 TRABD2BA6NFA1 517 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 PIP5K1CO60331 668 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 PGCP20142 388 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 GSTM3P21266 225 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 PTGDSP41222 190 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 OMPP47874 163 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 AIMP2Q13155 320 aaKnown RBP19.76■□□□□ 0.75
SMC4-221ENST00000489573 CBFBQ13951 182 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 B3GNTL1Q67FW5 361 aaPredicted RBP19.76■□□□□ 0.75
SMC4-221ENST00000489573 BICRALQ6AI39 1079 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 CD300LDQ6UXZ3 194 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 ZNF563Q8TA94 476 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 CCNL2Q96S94 520 aaPredicted RBP19.76■□□□□ 0.75
SMC4-221ENST00000489573 ATP13A2Q9NQ11 1180 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 HPF1Q9NWY4 346 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 CHCHD2Q9Y6H1 151 aaPredicted RBP19.76■□□□□ 0.75
SMC4-221ENST00000489573 CEP250Q9BV73 2442 aa19.76■□□□□ 0.75
SMC4-221ENST00000489573 GMFGO60234 142 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 OSMP13725 252 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 ST13P50502 369 aaKnown RBP19.75■□□□□ 0.75
SMC4-221ENST00000489573 ESRRGP62508 458 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 COX10Q12887 443 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 IL18R1Q13478 541 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 KEAP1Q14145 624 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 MEP1AQ16819 746 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 COL28A1Q2UY09 1125 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 TBC1D25Q3MII6 688 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 ACER2Q5QJU3 275 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 TMEM81Q6P7N7 255 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 PSMF1Q92530 271 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 FAM46AQ96IP4 442 aaKnown RBP19.75■□□□□ 0.75
SMC4-221ENST00000489573 KLHDC3Q9BQ90 382 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 ZNF426Q9BUY5 554 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 HHATLQ9HCP6 504 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 SDHAF3Q9NRP4 125 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 PPP4R1LQ9P1A2 415 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 REV1Q9UBZ9 1251 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 MED31Q9Y3C7 131 aa19.75■□□□□ 0.75
SMC4-221ENST00000489573 WIF1Q9Y5W5 379 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms