RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 APOOLQ6UXV4 268 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 TRAPPC6BQ86SZ2 158 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 PM20D2Q8IYS1 436 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 SLC2A12Q8TD20 617 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 PCNPQ8WW12 178 aaKnown RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 SENP5Q96HI0 755 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 OR51B6Q9H340 312 aa16.51■□□□□ 0.23
NPHP4-209ENST00000489180 SPATA6Q9NWH7 488 aaPredicted RBP16.51■□□□□ 0.23
NPHP4-209ENST00000489180 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 CLDN24A6NM45 220 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 GAB1Q13480 694 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ERV3-1Q14264 604 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 PGM2L1Q6PCE3 622 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 Q6ZSR6 202 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 OR14K1Q8NGZ2 314 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 SPTSSAQ969W0 71 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 PLEKHA3Q9HB20 300 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 BIN3Q9NQY0 253 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ARHGAP33O14559 1287 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 GLO1Q04760 184 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 IRF4Q15306 451 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 SPRED1Q7Z699 444 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 PGBD5Q8N414 524 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 CCDC71LQ8N9Z2 235 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ACBD4Q8NC06 268 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 RADILQ96JH8 1075 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 CASD1Q96PB1 797 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ARNT2Q9HBZ2 717 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 TRIM64BA6NI03 449 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 SRPX2O60687 465 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-209ENST00000489180 IL13RA1P78552 427 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 SLC7A13Q8TCU3 470 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 GIMAP1Q8WWP7 306 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 KDM3BQ7LBC6 1761 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 A0A0J9YY10 115 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 CDC14CA4D256 554 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 SLC16A7O60669 478 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF679Q8IYX0 411 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 SIMC1Q8NDZ2 872 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 MYADMQ96S97 322 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 EGFP01133 1207 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 DAP3P51398 398 aaKnown RBP16.5■□□□□ 0.23
NPHP4-209ENST00000489180 OR5M10Q6IEU7 315 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 LYPD4Q6UWN0 246 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 OR13C2Q8NGS9 318 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 OR1S1Q8NH92 325 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ZBTB8AQ96BR9 441 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 CXCL16Q9H2A7 254 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 ACKR4Q9NPB9 350 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 MYH1P12882 1939 aa16.5■□□□□ 0.23
NPHP4-209ENST00000489180 A8MVJ9 347 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CASP3P42574 277 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CLEC14AQ86T13 490 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 LHX3Q9UBR4 397 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 PTHP01270 115 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 XCR1P46094 333 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CXADRP78310 365 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 TMEM184AQ6ZMB5 413 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 FCRLAQ7L513 359 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 LRRC28Q86X40 367 aaPredicted RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 TMEFF1Q8IYR6 380 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 DNAJC22Q8N4W6 341 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF587Q96SQ5 575 aaPredicted RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ADOQ96SZ5 270 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CPEB1Q9BZB8 566 aaKnown RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CACNG3O60359 315 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 IL1AP01583 271 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 PRKACAP17612 351 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF136P52737 540 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ADARB1P78563 741 aaKnown RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 MORN1Q5T089 497 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 PAQR9Q6ZVX9 377 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 STEAP2Q8NFT2 490 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CENPOQ9BU64 300 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CSNK1G1Q9HCP0 422 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 TESQ9UGI8 421 aaKnown RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 SLC9B1P1A6NJY1 282 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 TAS2R31P59538 309 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 UBE2NP61088 152 aaKnown RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 LTBQ06643 244 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 SERTAD2Q14140 314 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 SLC22A6Q4U2R8 563 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF585AQ6P3V2 769 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ABHD12BQ7Z5M8 362 aaPredicted RBP16.49■□□□□ 0.23
NPHP4-209ENST00000489180 TANKQ92844 425 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 SLAMF9Q96A28 289 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF583Q96ND8 569 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 NKX2-4Q9H2Z4 354 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 INIPQ9NRY2 104 aa16.49■□□□□ 0.23
NPHP4-209ENST00000489180 CCDC163A0A0D9SF12 145 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 FTCDNL1E5RQL4 147 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 F13BP05160 661 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 HIST1H1TP22492 207 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 TSSK4Q6SA08 328 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 OR8J2Q8NGG1 315 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 OR56B2PQ8NGI1 322 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 UBXN10Q96LJ8 280 aa16.48■□□□□ 0.23
NPHP4-209ENST00000489180 ZNF436Q9C0F3 470 aaPredicted RBP16.48■□□□□ 0.23
NPHP4-209ENST00000489180 KDM4EB2RXH2 506 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms