RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 IFI6P09912 130 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 ZNF23P17027 643 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 SLC7A1P30825 629 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 DUSP5Q16690 384 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 SWI5Q1ZZU3 235 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 TEX35Q5T0J7 233 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 FBXW9Q5XUX1 488 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 NUP43Q8NFH3 380 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 CEP70Q8NHQ1 597 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 FBXO17Q96EF6 278 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 GIMAP5Q96F15 307 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 OTUB1Q96FW1 271 aaPredicted RBP14.19□□□□□ -0.14
USP48-210ENST00000489108 ZNF382Q96SR6 550 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 TRMOQ9BU70 441 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 TMEFF2Q9UIK5 374 aaPredicted RBP14.19□□□□□ -0.14
USP48-210ENST00000489108 CARD8Q9Y2G2 431 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 GPC6Q9Y625 555 aaPredicted RBP14.19□□□□□ -0.14
USP48-210ENST00000489108 FKBP7Q9Y680 259 aa14.19□□□□□ -0.14
USP48-210ENST00000489108 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP48-210ENST00000489108 MGAM2Q2M2H8 2515 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 LRP5LA4QPB2 252 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 KIF2AO00139 706 aaPredicted RBP14.18□□□□□ -0.14
USP48-210ENST00000489108 VENTXO95231 258 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 PRKCAP17252 672 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 LCN1P31025 176 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 GPC1P35052 558 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 P2RX1P51575 399 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 FOXG1P55316 489 aaPredicted RBP14.18□□□□□ -0.14
USP48-210ENST00000489108 CAV1Q03135 178 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 ZNF678Q5SXM1 525 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 ZDHHC24Q6UX98 284 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 SGMS2Q8NHU3 365 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 GPR119Q8TDV5 335 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 C16orf58Q96GQ5 468 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 KCNA7Q96RP8 456 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 BHLHE41Q9C0J9 482 aaPredicted RBP14.18□□□□□ -0.14
USP48-210ENST00000489108 BPESC1Q9GZL8 116 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 OCEL1Q9H607 264 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 FKRPQ9H9S5 495 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 ICAM5Q9UMF0 924 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
USP48-210ENST00000489108 POLR3HQ9Y535 204 aaPredicted RBP14.18□□□□□ -0.14
USP48-210ENST00000489108 SERPINB4P48594 390 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 PHC1P78364 1004 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 GABRA6Q16445 453 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 LRIG3Q6UXM1 1119 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 SZRD1Q7Z422 152 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 MTERF4Q7Z6M4 381 aaKnown RBP14.17□□□□□ -0.14
USP48-210ENST00000489108 ANKS4BQ8N8V4 417 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 WDR31Q8NA23 367 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 CIDECQ96AQ7 238 aaPredicted RBP14.17□□□□□ -0.14
USP48-210ENST00000489108 EGLN2Q96KS0 407 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 MRGPRX4Q96LA9 322 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 MUS81Q96NY9 551 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 OR5B2Q96R09 309 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 ANKZF1Q9H8Y5 726 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 WBP11Q9Y2W2 641 aaKnown RBP14.17□□□□□ -0.14
USP48-210ENST00000489108 ACTL7BQ9Y614 415 aa14.17□□□□□ -0.14
USP48-210ENST00000489108 NPIPA5A0A0B4J1W7 369 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 SERTM1A2A2V5 107 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 NPIPA7E9PJI5 369 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 ALOX5P09917 674 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 NPIPA8P0DM63 369 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 NTF4P34130 210 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 SELENBP1Q13228 472 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 NDUFAF6Q330K2 333 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 ANKRD26P1Q6NSI1 321 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 C3orf56Q8N813 242 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 COX18Q8N8Q8 333 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 ZMYND19Q96E35 227 aaPredicted RBP14.16□□□□□ -0.14
USP48-210ENST00000489108 TMEM237Q96Q45 408 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 VRK1Q99986 396 aaPredicted RBP14.16□□□□□ -0.14
USP48-210ENST00000489108 ASB6Q9NWX5 421 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 GIN1Q9NXP7 522 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 TAS2R16Q9NYV7 291 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 METRNQ9UJH8 293 aa14.16□□□□□ -0.14
USP48-210ENST00000489108 ATP6V1G2-DDX39BF2Z307 99 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 GTPBP1O00178 669 aaKnown RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 H6PDO95479 791 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 ENO1P06733 434 aaKnown RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 IL2RGP31785 369 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 SUMO3P55854 103 aaPredicted RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 GNG11P61952 73 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 POU6F2P78424 691 aaPredicted RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 MLC1Q15049 377 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 KLHL26Q53HC5 615 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 SLC25A53Q5H9E4 307 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 OR7E24Q6IFN5 339 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 NOXRED1Q6NXP6 359 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 ZNF540Q8NDQ6 660 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 RFWD2Q8NHY2 731 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 APH1AQ96BI3 265 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 MS4A4EQ96PG1 132 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 NAPGQ99747 312 aaPredicted RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 BTBD2Q9BX70 525 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 ACSS3Q9H6R3 686 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 MYOZ1Q9NP98 299 aaPredicted RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 MOKQ9UQ07 419 aa14.15□□□□□ -0.14
USP48-210ENST00000489108 NOSIPQ9Y314 301 aaKnown RBP14.15□□□□□ -0.14
USP48-210ENST00000489108 UTP11Q9Y3A2 253 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms