RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ZNF350Q9GZX5 532 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 LAT2Q9GZY6 243 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 OPN3Q9H1Y3 402 aaPredicted RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 RAD21L1Q9H4I0 556 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ARMC7Q9H6L4 198 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 RNF122Q9H9V4 155 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 TCF7L2Q9NQB0 619 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 INTS9Q9NV88 658 aaKnown RBP8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CALML5Q9NZT1 146 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 ZIM2Q9NZV7 527 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 CLEC4AQ9UMR7 237 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 GPR45Q9Y5Y3 372 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 USH1CQ9Y6N9 552 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 PDZD2O15018 2839 aa8.2□□□□□ -1.1
HDAC6-232ENST00000489053 TEP1Q99973 2627 aaKnown RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 EXPH5Q8NEV8 1989 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 A8MXE2 369 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 B4DXG7 233 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 C5orf58C9J3I9 102 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ANKRD28O15084 1053 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ADAMDEC1O15204 470 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 KIAA0513O60268 411 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 FCMRO60667 390 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 TNFSF13O75888 250 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 AQP8O94778 261 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 TGDSO95455 350 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 H6PDO95479 791 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 LINGO3P0C6S8 592 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 CD8BP10966 210 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 CD1EP15812 388 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 IL7RP16871 459 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 POLR2JP52435 117 aaKnown RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ART1P52961 327 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 CSNK2A1P68400 391 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 KEAP1Q14145 624 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 POU4F3Q15319 338 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ZNF141Q15928 474 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 C3orf33Q6P1S2 294 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 VWA1Q6PCB0 445 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 CBLN3Q6UW01 205 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 MSANTD1Q6ZTZ1 278 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 BTLAQ7Z6A9 289 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 GGNQ86UU5 652 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 PEX5LQ8IYB4 626 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 GPR119Q8TDV5 335 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ZFP90Q8TF47 636 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 SLC25A43Q8WUT9 341 aaPredicted RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 STARD4Q96DR4 205 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ZC3HAV1LQ96H79 300 aaKnown RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 C7orf26Q96N11 449 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 TRNT1Q96Q11 434 aaKnown RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 OR5B2Q96R09 309 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 TACO1Q9BSH4 297 aaKnown RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 C12orf49Q9H741 205 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 RASSF1Q9NS23 344 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 THUMPD1Q9NXG2 353 aaKnown RBP8.19□□□□□ -1.1
HDAC6-232ENST00000489053 JKAMPQ9P055 326 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 P2RX2Q9UBL9 471 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 ICAM5Q9UMF0 924 aa8.19□□□□□ -1.1
HDAC6-232ENST00000489053 A0A0J9YW62 118 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 FAM234BA2RU67 622 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 NPIPB9F8W1W9 429 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 HMGN4O00479 90 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 OIP5O43482 229 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 SS18L1O75177 396 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 UGT2B17O75795 530 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 PRKD3O94806 890 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 DBIP07108 87 aaKnown RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 PRKCAP17252 672 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 NCF2P19878 526 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 ENPP1P22413 925 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 IL32P24001 234 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 UGT2B10P36537 528 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 MAGEA8P43361 318 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 KIR2DL2P43627 348 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 HTR3AP46098 478 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 CRISP3P54108 245 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 AQP5P55064 265 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 COPZ1P61923 177 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 PPP2R2AP63151 447 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 SKP2Q13309 424 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 LARS2Q15031 903 aaKnown RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 DAZAP2Q15038 168 aaPredicted RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 TMEM44Q2T9K0 475 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 TYW3Q6IPR3 259 aaKnown RBP8.18□□□□□ -1.1
HDAC6-232ENST00000489053 HEPHL1Q6MZM0 1159 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 ALKBH2Q6NS38 261 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 BEND4Q6ZU67 534 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 FCRLAQ7L513 359 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 CDC20BQ86Y33 519 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 CMIPQ8IY22 773 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 SLC43A2Q8N370 569 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 WDR60Q8WVS4 1066 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 TEX37Q96LM6 180 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 OR52B2Q96RD2 323 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 INPP5KQ9BT40 448 aa8.18□□□□□ -1.1
HDAC6-232ENST00000489053 SERHL2Q9H4I8 314 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms