RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ATP6AP1LQ52LC2 224 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 SLC43A2Q8N370 569 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 TMCO5AQ8N6Q1 288 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 LRRN4CLQ8ND94 238 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 ATP6V1C2Q8NEY4 427 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 AGR3Q8TD06 166 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 GPR119Q8TDV5 335 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 HSD17B8Q92506 261 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 MRGPRX4Q96LA9 322 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 C1orf50Q9BV19 199 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 MECRQ9BV79 373 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 ANKZF1Q9H8Y5 726 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 EML4Q9HC35 981 aaKnown RBP16.36■□□□□ 0.21
HDAC6-231ENST00000488905 KLHL9Q9P2J3 617 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 ADAM21Q9UKJ8 722 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 KCNE3Q9Y6H6 103 aa16.36■□□□□ 0.21
HDAC6-231ENST00000488905 IGHV3-15A0A0B4J1V0 119 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 OVOL3O00110 214 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 GTPBP1O00178 669 aaKnown RBP16.35■□□□□ 0.21
HDAC6-231ENST00000488905 LYPLA1O75608 230 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-231ENST00000488905 ADAP00813 363 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 SOD3P08294 240 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 DANCRP0C864 163 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 ENPP1P22413 925 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 P2RY6Q15077 328 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 SLC25A53Q5H9E4 307 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 SEZ6L2Q6UXD5 910 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 ATG4DQ86TL0 474 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-231ENST00000488905 NATD1Q8N6N6 113 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 KBTBD8Q8NFY9 601 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 MOAP1Q96BY2 351 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 ZNF524Q96C55 264 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 PSD2Q9BQI7 771 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 BCO1Q9HAY6 547 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 DTNAQ9Y4J8 743 aa16.35■□□□□ 0.21
HDAC6-231ENST00000488905 MAGED1Q9Y5V3 778 aaPredicted RBP16.35■□□□□ 0.21
HDAC6-231ENST00000488905 A0A1W2PNR3 127 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 ETV2O00321 342 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 UBL4AP11441 157 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 CCR4P51679 360 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 RAC3P60763 192 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 BSPH1Q075Z2 132 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 ITGADQ13349 1161 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 CBFBQ13951 182 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 QPRTQ15274 297 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 LSM12Q3MHD2 195 aaKnown RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 ZNF672Q499Z4 452 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 C3orf33Q6P1S2 294 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 ZCCHC23Q6ZST2 131 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 Q6ZT83 130 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 KRTCAP2Q8N6L1 136 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 FNDC5Q8NAU1 212 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 TOR1AIP2Q8NFQ8 470 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 OR5D16Q8NGK9 328 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 OR5W2Q8NH69 310 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 OR5AK3PQ8NH89 298 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 RFWD2Q8NHY2 731 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 SMAP2Q8WU79 429 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 NEUROG1Q92886 237 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 GTPBP3Q969Y2 492 aaKnown RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 TRMT61AQ96FX7 289 aaKnown RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 C3orf30Q96M34 536 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 OR7D2Q96RA2 312 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 USB1Q9BQ65 265 aaKnown RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 SLC17A7Q9P2U7 560 aa16.34■□□□□ 0.21
HDAC6-231ENST00000488905 ING1Q9UK53 422 aaPredicted RBP16.34■□□□□ 0.21
HDAC6-231ENST00000488905 A0A1W2PP18 115 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF814B7Z6K7 855 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 RNF223E7ERA6 249 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 ZNF264O43296 627 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 EIF4E2O60573 245 aaKnown RBP16.33■□□□□ 0.2
HDAC6-231ENST00000488905 SKAP2O75563 359 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-231ENST00000488905 SLU7O95391 586 aaKnown RBP16.33■□□□□ 0.2
HDAC6-231ENST00000488905 SOAT1P35610 550 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 CDKN1AP38936 164 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 OR3A2P47893 321 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 DMTNQ08495 405 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 C6orf136Q5SQH8 315 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 PDZK1Q5T2W1 519 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 IL23RQ5VWK5 629 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 MAPK1IP1LQ8NDC0 245 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 PIWIL2Q8TC59 973 aaKnown RBP16.33■□□□□ 0.2
HDAC6-231ENST00000488905 COQ8BQ96D53 544 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 PRPF18Q99633 342 aaKnown RBP16.33■□□□□ 0.2
HDAC6-231ENST00000488905 BHLHE41Q9C0J9 482 aaPredicted RBP16.33■□□□□ 0.2
HDAC6-231ENST00000488905 NMUR2Q9GZQ4 415 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 L2HGDHQ9H9P8 463 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 STAB1Q9NY15 2570 aa16.33■□□□□ 0.2
HDAC6-231ENST00000488905 ESPNB1AK53 854 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 SMAD9O15198 467 aaKnown RBP16.32■□□□□ 0.2
HDAC6-231ENST00000488905 CFLARO15519 480 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 CYTIPO60759 359 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 CRLF1O75462 422 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 LYZL6O75951 148 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 H6PDO95479 791 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 PRPS1L1P21108 318 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 ARRB2P32121 409 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 SERPINB5P36952 375 aa16.32■□□□□ 0.2
HDAC6-231ENST00000488905 RPS26P62854 115 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms