RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 UTP23Q9BRU9 249 aaKnown RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 DCUN1D5Q9BTE7 237 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 TRIM45Q9H8W5 580 aaPredicted RBP17.75■□□□□ 0.43
CCM2-216ENST00000488727 KCNE3Q9Y6H6 103 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 EML6Q6ZMW3 1958 aa17.75■□□□□ 0.43
CCM2-216ENST00000488727 IGSF10Q6WRI0 2623 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 TLN1Q9Y490 2541 aaKnown RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 GXYLT2A0PJZ3 443 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 PTGES3LE9PB15 166 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 WBP4O75554 376 aaKnown RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 IFNW1P05000 195 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ALOX5P09917 674 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 FBXO45P0C2W1 286 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ACVR2AP27037 513 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 CYB561P49447 251 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 NRG3P56975 720 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 OC90Q02509 493 aaPredicted RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 EMX1Q04741 257 aaPredicted RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 NPTX1Q15818 432 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ZNF791Q3KP31 576 aaPredicted RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 OPN5Q6U736 354 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ENTHD1Q8IYW4 607 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 SVOPQ8N4V2 548 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 MIPOL1Q8TD10 442 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 GPR151Q8TDV0 419 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 APH1BQ8WW43 257 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 CDS1Q92903 461 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 SPACA9Q96E40 222 aaPredicted RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 WBP1Q96G27 269 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 SLC35A4Q96G79 324 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 OR7D2Q96RA2 312 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 SIGLEC11Q96RL6 698 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 OR51I1Q9H343 314 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 Q9N2J8 555 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ACER3Q9NUN7 267 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 LRFN1Q9P244 771 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ERVK-18Q9QC07 812 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ENOPH1Q9UHY7 261 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 ENPP5Q9UJA9 477 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 FAM32AQ9Y421 112 aaKnown RBP17.74■□□□□ 0.43
CCM2-216ENST00000488727 OR10H1Q9Y4A9 318 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 PCDHGA10Q9Y5H3 936 aa17.74■□□□□ 0.43
CCM2-216ENST00000488727 TTC36A6NLP5 189 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 HMGN4O00479 90 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 NEURL1O76050 574 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 BCHEP06276 602 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 KRT20P35900 424 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 TNFSF10P50591 281 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 PLCXD2Q0VAA5 305 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 OR1C1Q15619 314 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 MAPK11Q15759 364 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 C11orf91Q3C1V1 193 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 FGD3Q5JSP0 725 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 DESI1Q6ICB0 168 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 SPINK14Q6IE38 97 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 TNFAIP8L2Q6P589 184 aaPredicted RBP17.73■□□□□ 0.43
CCM2-216ENST00000488727 ANKRD13BQ86YJ7 626 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 SLC34A3Q8N130 599 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 CYP4Z2PQ8N1L4 340 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 PARP8Q8N3A8 854 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 ZADH2Q8N4Q0 377 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 MDS2Q8NDY4 140 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 RASSF5Q8WWW0 418 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 TM9SF4Q92544 642 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 OMA1Q96E52 524 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 STACQ99469 402 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 SLC25A18Q9H1K4 315 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 PIGUQ9H490 435 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 DUSP22Q9NRW4 184 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 PLCXD1Q9NUJ7 323 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 HPF1Q9NWY4 346 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 GIN1Q9NXP7 522 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 CBLCQ9ULV8 474 aa17.73■□□□□ 0.43
CCM2-216ENST00000488727 RGS10O43665 173 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 FAM20BO75063 409 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 MFN2O95140 757 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 CBLP22681 906 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 CASRP41180 1078 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 FBXW4P57775 412 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 CYP27C1Q4G0S4 372 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 PRSS48Q7RTY5 328 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 MDGA2Q7Z553 956 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 BCORP1Q8N888 145 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 SMYD1Q8NB12 490 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 ADAMTS15Q8TE58 950 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 UBL7Q96S82 380 aaPredicted RBP17.72■□□□□ 0.43
CCM2-216ENST00000488727 FUNDC2Q9BWH2 189 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 CCDC90BQ9GZT6 254 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 RNF6Q9Y252 685 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 ZFYVE26Q68DK2 2539 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 J3KTA2 159 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 PPM1BO75688 479 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 INMTO95050 263 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 CCNB2O95067 398 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 GADD45GO95257 159 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 IGKV1D-16P01601 117 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 NTRK2Q16620 822 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 DUSP7Q16829 419 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 SLC16A12Q6ZSM3 486 aa17.72■□□□□ 0.43
CCM2-216ENST00000488727 COX18Q8N8Q8 333 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms