RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 HIPK1Q86Z02 1210 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 STEAP2Q8NFT2 490 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 AKAP1Q92667 903 aaKnown RBP eCLIP10.94□□□□□ -0.66
TTC3-221ENST00000488522 ZBTB8AQ96BR9 441 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 ELP4Q96EB1 424 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 ZNF764Q96H86 408 aaPredicted RBP10.94□□□□□ -0.66
TTC3-221ENST00000488522 AMDHD1Q96NU7 426 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 BBS4Q96RK4 519 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 REG4Q9BYZ8 158 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 TBL1XR1Q9BZK7 514 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 GLIPR2Q9H4G4 154 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 REEP4Q9H6H4 257 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 DDX18Q9NVP1 670 aaKnown RBP10.94□□□□□ -0.66
TTC3-221ENST00000488522 FREM1Q5H8C1 2179 aa10.94□□□□□ -0.66
TTC3-221ENST00000488522 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 SCAMP2O15127 329 aaKnown RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 CD5LO43866 347 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 NKX2-2O95096 273 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 PLGP00747 810 aaPredicted RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 IGKV1D-16P01601 117 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 LCN1P31025 176 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 IDUAP35475 653 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 STX1BP61266 288 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 SF3A3Q12874 501 aaKnown RBP eCLIP10.93□□□□□ -0.66
TTC3-221ENST00000488522 ZNHIT3Q15649 155 aaPredicted RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 PLPPR5Q32ZL2 321 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 GRAMD1BQ3KR37 738 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 NCMAPQ5T1S8 102 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 PODNL1Q6PEZ8 512 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 TMEM107Q6UX40 140 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 STK32CQ86UX6 486 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 WFDC8Q8IUA0 241 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 GABRG1Q8N1C3 465 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 OR2V1Q8NHB1 315 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 RNF128Q8TEB7 428 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 FBXW5Q969U6 566 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 PPCDCQ96CD2 204 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 MTERF3Q96E29 417 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 TRMT61AQ96FX7 289 aaKnown RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 PRPF18Q99633 342 aaKnown RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 USB1Q9BQ65 265 aaKnown RBP10.93□□□□□ -0.66
TTC3-221ENST00000488522 HDHD5Q9BXW7 423 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 PRRG4Q9BZD6 226 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 DPY30Q9C005 99 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 C3orf14Q9HBI5 128 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 GP6Q9HCN6 339 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 NTMQ9P121 344 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 CLEC4AQ9UMR7 237 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 TRIM33Q9UPN9 1127 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 LAMP3Q9UQV4 416 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 RNF115Q9Y4L5 304 aa10.93□□□□□ -0.66
TTC3-221ENST00000488522 SHISA8B8ZZ34 492 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 CXCL13O43927 109 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 KCNH1O95259 989 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 SOD3P08294 240 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 DRD4P21917 467 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 ADH6P28332 368 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 NTSP30990 170 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 CLNS1AP54105 237 aaKnown RBP10.92□□□□□ -0.66
TTC3-221ENST00000488522 NME5P56597 212 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 CLDN8P56748 225 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 C21orf58P58505 322 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 IRX1P78414 480 aaPredicted RBP10.92□□□□□ -0.66
TTC3-221ENST00000488522 PDE7AQ13946 482 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 VEZF1Q14119 521 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 ZNF239Q16600 458 aaKnown RBP10.92□□□□□ -0.66
TTC3-221ENST00000488522 PDCD4Q53EL6 469 aaKnown RBP10.92□□□□□ -0.66
TTC3-221ENST00000488522 ANKRD26P1Q6NSI1 321 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 MFSD12Q6NUT3 480 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 TFAP2EQ6VUC0 442 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 SPATA21Q7Z572 469 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 PHC2Q8IXK0 858 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 KRTCAP2Q8N6L1 136 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 FAM110BQ8TC76 370 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 S100PBPQ96BU1 408 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 ZBTB18Q99592 522 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 NPAS1Q99742 590 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 ELAC2Q9BQ52 826 aaKnown RBP10.92□□□□□ -0.66
TTC3-221ENST00000488522 SLCO5A1Q9H2Y9 848 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 SH3BP4Q9P0V3 963 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 VDAC3Q9Y277 283 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 SNX8Q9Y5X2 465 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 GPR45Q9Y5Y3 372 aa10.92□□□□□ -0.66
TTC3-221ENST00000488522 A0A0J9YW62 118 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 A0A1W2PQD3 144 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 A0A1W2PRB8 838 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 GXYLT2A0PJZ3 443 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 ANKRD28O15084 1053 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 TBX19O60806 448 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 SHOX2O60902 331 aaPredicted RBP10.91□□□□□ -0.66
TTC3-221ENST00000488522 SLC22A3O75751 556 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 SYNGR4O95473 234 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 OXSR1O95747 527 aaPredicted RBP10.91□□□□□ -0.66
TTC3-221ENST00000488522 IFNA2P01563 188 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 PABPC4LP0CB38 370 aaKnown RBP10.91□□□□□ -0.66
TTC3-221ENST00000488522 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
TTC3-221ENST00000488522 ELK4P28324 431 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 UFM1P61960 85 aa10.91□□□□□ -0.66
TTC3-221ENST00000488522 SQLEQ14534 574 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms