RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ELK4P28324 431 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 EIF1P41567 113 aaKnown RBP12.75□□□□□ -0.37
COL9A2-208ENST00000488463 KIR2DL2P43627 348 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-208ENST00000488463 SLC6A8P48029 635 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 EEFSECP57772 596 aaKnown RBP12.75□□□□□ -0.37
COL9A2-208ENST00000488463 SNTB1Q13884 538 aaKnown RBP12.75□□□□□ -0.37
COL9A2-208ENST00000488463 PON3Q15166 354 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 LRIF1Q5T3J3 769 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 LRRC74BQ6ZQY2 392 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 ZNF614Q8N883 585 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 FBXO27Q8NI29 283 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 SMPDL3BQ92485 455 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 RNASE6Q93091 150 aaKnown RBP12.75□□□□□ -0.37
COL9A2-208ENST00000488463 STARD4Q96DR4 205 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 TMEM45AQ9NWC5 275 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 SLC25A37Q9NYZ2 338 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 DSPPQ9NZW4 1301 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 SLAMF8Q9P0V8 285 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 LIPT1Q9Y234 373 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 GPC6Q9Y625 555 aaPredicted RBP12.75□□□□□ -0.37
COL9A2-208ENST00000488463 GMEB1Q9Y692 573 aa12.75□□□□□ -0.37
COL9A2-208ENST00000488463 ITPR3Q14573 2671 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 A0A096LPI6 279 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 AGAP5A6NIR3 686 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 ENO4A6NNW6 628 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 A8MXE2 369 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 EIF1AYO14602 144 aaKnown RBP12.74□□□□□ -0.37
COL9A2-208ENST00000488463 KRT75O95678 551 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 CSTAP01040 98 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 CGAP01215 116 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 TFPTP0C1Z6 253 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 UBTFL6P0CB48 400 aaPredicted RBP12.74□□□□□ -0.37
COL9A2-208ENST00000488463 SSTR2P30874 369 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 QPRTQ15274 297 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 GPAT3Q53EU6 434 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 PAGE3Q5JUK9 113 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 ESPNLQ6ZVH7 1005 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 EIF3MQ7L2H7 374 aaKnown RBP12.74□□□□□ -0.37
COL9A2-208ENST00000488463 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 C10orf111Q8N326 155 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 THOC1Q96FV9 657 aaKnown RBP12.74□□□□□ -0.37
COL9A2-208ENST00000488463 MRGPRX4Q96LA9 322 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 THUMPD3Q9BV44 507 aaKnown RBP12.74□□□□□ -0.37
COL9A2-208ENST00000488463 TMEM185BQ9H7F4 350 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 RMND5AQ9H871 391 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 COQ10BQ9H8M1 238 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 KCNN3Q9UGI6 736 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 PRR14LQ5THK1 2151 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 VPS13CQ709C8 3753 aa12.74□□□□□ -0.37
COL9A2-208ENST00000488463 TNFSF11O14788 317 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 CXCL13O43927 109 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 BMP2P12643 396 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 EIF1AXP47813 144 aaKnown RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 RPS3AP61247 264 aaKnown RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 IRX1P78414 480 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 KCNJ10P78508 379 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 OR2A2Q6IF42 318 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 CGB2Q6NT52 195 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 VWA1Q6PCB0 445 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 BTLAQ7Z6A9 289 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 SLC38A5Q8WUX1 472 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 CNOT9Q92600 299 aaKnown RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 PMM1Q92871 262 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 SPDL1Q96EA4 605 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 LURAP1Q96LR2 239 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 RSPO3Q9BXY4 272 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 MCCC2Q9HCC0 563 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 EXOSC3Q9NQT5 275 aaKnown RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 CCDC167Q9P0B6 97 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 FOXD3Q9UJU5 478 aaPredicted RBP12.73□□□□□ -0.37
COL9A2-208ENST00000488463 DCTN4Q9UJW0 460 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 SLC35A3Q9Y2D2 325 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 CHST2Q9Y4C5 530 aa12.73□□□□□ -0.37
COL9A2-208ENST00000488463 ROS1P08922 2347 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 FAM221AA4D161 298 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 EEF1E1-BLOC1S5C9J1V9 151 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 EEF1E1O43324 174 aaKnown RBP12.72□□□□□ -0.37
COL9A2-208ENST00000488463 NUDT14O95848 222 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 NUDT7P0C024 238 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 UQCRC1P31930 480 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 ANXA11P50995 505 aaKnown RBP12.72□□□□□ -0.37
COL9A2-208ENST00000488463 SESN3P58005 492 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 DSTNP60981 165 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 STX1BP61266 288 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 TLE4Q04727 773 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 CBFBQ13951 182 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 SQLEQ14534 574 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 RGNQ15493 299 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 C6orf10Q5SRN2 563 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 ZNF474Q6S9Z5 364 aaPredicted RBP12.72□□□□□ -0.37
COL9A2-208ENST00000488463 DLEU7Q6UYE1 221 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 CHMP1BQ7LBR1 199 aa12.72□□□□□ -0.37
COL9A2-208ENST00000488463 LSRQ86X29 649 aaPredicted RBP12.72□□□□□ -0.37
COL9A2-208ENST00000488463 TMCO5AQ8N6Q1 288 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms