RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 TMEM234Q8WY98 164 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 CNOT9Q92600 299 aaKnown RBP9.36□□□□□ -0.91
SKA1-204ENST00000488454 C1GALT1C1Q96EU7 318 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 TPD52L3Q96J77 140 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 LRGUKQ96M69 825 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 NSMCE2Q96MF7 247 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 RNF145Q96MT1 663 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 MMADHCQ9H3L0 296 aaPredicted RBP9.36□□□□□ -0.91
SKA1-204ENST00000488454 MUC13Q9H3R2 512 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 GORASP2Q9H8Y8 452 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 RPS6KA6Q9UK32 745 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 PRDM4Q9UKN5 801 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 MRPS18CQ9Y3D5 142 aaKnown RBP9.36□□□□□ -0.91
SKA1-204ENST00000488454 SNX13Q9Y5W8 968 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
SKA1-204ENST00000488454 KMT2BQ9UMN6 2715 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 TRGV5A0A0B4J1U4 118 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 C17orf51A8MQB3 221 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 B8ZZF3 427 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SYT5O00445 386 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 GCM2O75603 506 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 ZNF682O95780 498 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SERPINA1P01009 418 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 HPNP05981 417 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 FESP07332 822 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 CD33P20138 364 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 EIF1P41567 113 aaKnown RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 KCNJ5P48544 419 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 MLLT10P55197 1068 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 NCALDP61601 193 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SELENOWP63302 87 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SKP2Q13309 424 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 TRIM25Q14258 630 aaKnown RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 DUSP7Q16829 419 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 GLYR1Q49A26 553 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 AAGABQ6PD74 315 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 CBLN3Q6UW01 205 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 FKBP9P1Q75LS8 142 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 YRDCQ86U90 279 aaKnown RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 DHFR2Q86XF0 187 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 EID3Q8N140 333 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 FAM83FQ8NEG4 500 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 NR4A3Q92570 626 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SLC35B4Q969S0 331 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 ZBTB8AQ96BR9 441 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 TAMM41Q96BW9 452 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 CLPTM1LQ96KA5 538 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 BBC3Q96PG8 261 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 PIGQQ9BRB3 760 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 CADM1Q9BY67 442 aaKnown RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 TRIM15Q9C019 465 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 PCDHAC1Q9H158 963 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 LRMDAQ9H2I8 198 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 ZNF703Q9H7S9 590 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 ACKR4Q9NPB9 350 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 MED17Q9NVC6 651 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 ASF1BQ9NVP2 202 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 DNAJB12Q9NXW2 375 aaKnown RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 STOML1Q9UBI4 398 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 ICAM5Q9UMF0 924 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SAMD4AQ9UPU9 718 aaKnown RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 VDAC3Q9Y277 283 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 SLC9A8Q9Y2E8 581 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 RPH3AQ9Y2J0 694 aaPredicted RBP9.35□□□□□ -0.91
SKA1-204ENST00000488454 PIEZO2Q9H5I5 2752 aa9.35□□□□□ -0.91
SKA1-204ENST00000488454 ATMQ13315 3056 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 AP3D1O14617 1153 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 ADAM10O14672 748 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 OIP5O43482 229 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 SUSD5O60279 629 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 TPST1O60507 370 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 HCN1O60741 890 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 LGI1O95970 557 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 GKN3PP0CG01 181 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 GP1BBP13224 206 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 TCEA1P23193 301 aaKnown RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 IDH2P48735 452 aaKnown RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 RGS8P57771 180 aaPredicted RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 TRAP1Q12931 704 aaKnown RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 QPRTQ15274 297 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 SOWAHCQ53LP3 525 aaPredicted RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 WIPI1Q5MNZ9 446 aaPredicted RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 RAET1LQ5VY80 246 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 ARSKQ6UWY0 536 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 CBLL1Q75N03 491 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 RANBP3LQ86VV4 465 aaPredicted RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 SPPL2CQ8IUH8 684 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 ULK2Q8IYT8 1036 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 GHDCQ8N2G8 530 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 CADM2Q8N3J6 435 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 FAM71CQ8NEG0 241 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 GPR119Q8TDV5 335 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 POP5Q969H6 163 aaKnown RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 CCDC124Q96CT7 223 aaKnown RBP9.34□□□□□ -0.91
SKA1-204ENST00000488454 ASB9Q96DX5 294 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 HSH2DQ96JZ2 352 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 GPR137Q96N19 417 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 SFXN2Q96NB2 322 aa9.34□□□□□ -0.91
SKA1-204ENST00000488454 OR2B2Q9GZK3 357 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms