RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 C11orf98E9PRG8 122 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 TYROBPO43914 113 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 LCMT2O60294 686 aaKnown RBP3.18□□□□□ -1.9
ITGB1-214ENST00000488427 REC8O95072 547 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 IGKV5-2P06315 115 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 P2RY4P51582 365 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 ARHGDIBP52566 201 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 RPS4XP62701 263 aaKnown RBP3.18□□□□□ -1.9
ITGB1-214ENST00000488427 GALK2Q01415 458 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 NPRL3Q12980 569 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 KIAA0040Q15053 153 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 SLC39A12Q504Y0 691 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 ZNF658Q5TYW1 1059 aaPredicted RBP3.18□□□□□ -1.9
ITGB1-214ENST00000488427 ZNF410Q86VK4 478 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 SLC22A16Q86VW1 577 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 NAXDQ8IW45 347 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 PEX5LQ8IYB4 626 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 FAF2Q96CS3 445 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 MAPKAP1Q9BPZ7 522 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 DEFB126Q9BYW3 111 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 HPS4Q9NQG7 708 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 VNN3Q9NY84 501 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 RCOR3Q9P2K3 495 aaPredicted RBP3.18□□□□□ -1.9
ITGB1-214ENST00000488427 KNSTRNQ9Y448 316 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 PHLPP2Q6ZVD8 1323 aa3.18□□□□□ -1.9
ITGB1-214ENST00000488427 PTPRDP23468 1912 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 A0A0J9YVX5 310 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 NPIPA2E9PIF3 369 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 RHOBTB1O94844 696 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 GOSR1O95249 250 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 SYNGR4O95473 234 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 HOXB7P09629 217 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 DUX4L4P0CJ87 422 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 HLA-EP13747 358 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 UGT1A6P19224 532 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 HMGCLP35914 325 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 MDH2P40926 338 aaKnown RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 XCR1P46094 333 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 ATXN3P54252 364 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 UCNP55089 124 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 NOP14P78316 857 aaKnown RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 CNTN2Q02246 1040 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 SEMG2Q02383 582 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 PDE7AQ13946 482 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 EIF2B1Q14232 305 aaKnown RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 TGIF1Q15583 401 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 CD226Q15762 336 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 QRICH1Q2TAL8 776 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 MS4A13Q5J8X5 152 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 TCHHL1Q5QJ38 904 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 METTL11BQ5VVY1 283 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 MEDAGQ5VYS4 303 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 ETFRF1Q6IPR1 90 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 Q8N7P7 452 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 MRPL43Q8N983 215 aaKnown RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 SPC24Q8NBT2 197 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 ZNF671Q8TAW3 534 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 ST7LQ8TDW4 575 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 GTSF1Q8WW33 167 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 TMEM37Q8WXS4 190 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 MRPL53Q96EL3 112 aaKnown RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 PHYHIPLQ96FC7 376 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 DDX47Q9H0S4 455 aaKnown RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 FAM124BQ9H5Z6 455 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-214ENST00000488427 ESM1Q9NQ30 184 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 CLEC4EQ9ULY5 219 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 NUDCQ9Y266 331 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 PCDH15Q96QU1 1955 aa3.17□□□□□ -1.9
ITGB1-214ENST00000488427 TRBV7-9A0A0J9YWB2 115 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 A0A1W2PQ72 361 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 VPS37CA5D8V6 355 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-214ENST00000488427 MFSD2BA6NFX1 497 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 TMEM110-MUSTN1A8MSY1 372 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 A8MX80 341 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 E7ENQ6 273 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 DUSP14O95147 198 aaKnown RBP3.16□□□□□ -1.9
ITGB1-214ENST00000488427 CT45A10P0DMU9 189 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 TMOD1P28289 359 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 HOXA6P31267 233 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 DRD3P35462 400 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 SAA4P35542 130 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 MAGEA4P43358 317 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 TKTL1P51854 596 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 UCP2P55851 309 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 PAX2Q02962 417 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 CCDC173Q0VFZ6 552 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 MSLNQ13421 630 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-214ENST00000488427 CARTPTQ16568 116 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 MAPK6Q16659 721 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 PAGE2BQ5JRK9 111 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 CGB2Q6NT52 195 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 ATRAIDQ6UW56 229 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 RAPH1Q70E73 1250 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 GET4Q7L5D6 327 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-214ENST00000488427 TMEM110Q86TL2 294 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 VPS36Q86VN1 386 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 SERPINA12Q8IW75 414 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 Q8N9G6 341 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-214ENST00000488427 FGF14Q92915 247 aa3.16□□□□□ -1.9
ITGB1-214ENST00000488427 ZIM3Q96PE6 472 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms