RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SDCCAG3Q96C92 435 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 MRGPRX4Q96LA9 322 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 HS6ST2Q96MM7 605 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 AMBRA1Q9C0C7 1298 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 RNPEPL1Q9HAU8 725 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 KRCC1Q9NPI7 259 aaPredicted RBP10.07□□□□□ -0.8
HDLBP-242ENST00000488013 PLA2G3Q9NZ20 509 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 STOML1Q9UBI4 398 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 ACAD8Q9UKU7 415 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 TMCC3Q9ULS5 477 aa10.07□□□□□ -0.8
HDLBP-242ENST00000488013 C7orf72A4D263 438 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 H3BNX3 289 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 hCG_2039718K7EN88 272 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ACOT7O00154 380 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ETV2O00321 342 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 PEX1O43933 1283 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 E2F6O75461 281 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 BAG2O95816 211 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 EPPINO95925 133 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 GP1BBP13224 206 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SRD5A2P31213 254 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RRM2P31350 389 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 DNAJA1P31689 397 aaKnown RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RYKP34925 604 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RBM34P42696 430 aaKnown RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF136P52737 540 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 VLDLRP98155 873 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 KCNAB2Q13303 367 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 TRAM2Q15035 370 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RCN1Q15293 331 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 OR1Q1Q15612 314 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 HYAL4Q2M3T9 481 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.06□□□□□ -0.84e-11■□□□□ 8.8
HDLBP-242ENST00000488013 ENTPD8Q5MY95 495 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 PRAMEF20Q5VT98 475 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 C5orf46Q6UWT4 87 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RRM2BQ7LG56 351 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 GRINAQ7Z429 371 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF227Q86WZ6 799 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RNF113BQ8IZP6 322 aaKnown RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SVOPLQ8N434 492 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 AMER2Q8N7J2 671 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 WDSUB1Q8N9V3 476 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ZFP62Q8NB50 900 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 OR2M7Q8NG81 312 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 OR10Q1Q8NGQ4 319 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 GPR119Q8TDV5 335 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ADAMTS16Q8TE57 1224 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SLC38A4Q969I6 547 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 C1GALT1C1Q96EU7 318 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SH3YL1Q96HL8 342 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 EPYCQ99645 322 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SLC19A3Q9BZV2 496 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 VCX3BQ9H321 246 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 NMNAT1Q9HAN9 279 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 GALNT9Q9HCQ5 603 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SERINC1Q9NRX5 453 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 AGPAT4Q9NRZ5 378 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 ACER3Q9NUN7 267 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 RIMS3Q9UJD0 308 aa10.06□□□□□ -0.8
HDLBP-242ENST00000488013 SPIN1Q9Y657 262 aaPredicted RBP10.06□□□□□ -0.8
HDLBP-242ENST00000488013 A0A0B4J2E0 115 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 A0A1B0GX12 115 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 CHP2O43745 196 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 TIPRLO75663 272 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 GADD45GO95257 159 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 GKN3PP0CG01 181 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ANPEPP15144 967 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF17P17021 662 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 DPP4P27487 766 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 APOBEC1P41238 236 aaKnown RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 IDH2P48735 452 aaKnown RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ERFP50548 548 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 POLR2HP52434 150 aaKnown RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 SPIBQ01892 262 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 PIN1Q13526 163 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ZNF169Q14929 603 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 IQCCQ4KMZ1 466 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 SLC25A53Q5H9E4 307 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ALG10BQ5I7T1 473 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 BICRALQ6AI39 1079 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 RPUSD3Q6P087 351 aaKnown RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 CBLN3Q6UW01 205 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 Q6ZS92 163 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 GALNTL5Q7Z4T8 443 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 HIPK1Q86Z02 1210 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ZDHHC13Q8IUH4 622 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 SULF2Q8IWU5 870 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 CADM2Q8N3J6 435 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 CATSPER1Q8NEC5 780 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 OR2M3Q8NG83 312 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 C9orf43Q8TAL5 461 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 ABHD17AQ96GS6 310 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 DHRS1Q96LJ7 313 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 JSRP1Q96MG2 331 aaPredicted RBP10.05□□□□□ -0.8
HDLBP-242ENST00000488013 SIGLEC12Q96PQ1 595 aa10.05□□□□□ -0.8
HDLBP-242ENST00000488013 PIGQQ9BRB3 760 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms