RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CARTPTQ16568 116 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 TMED8Q6PL24 325 aaPredicted RBP1.81□□□□□ -2.12
SMC4-219ENST00000487747 BRD3OSQ6XYD6 125 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 MS4A14Q96JA4 679 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 KCNA7Q96RP8 456 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 SLC25A51Q9H1U9 297 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 TERF2IPQ9NYB0 399 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 YTHDF2Q9Y5A9 579 aaKnown RBP1.81□□□□□ -2.12
SMC4-219ENST00000487747 TUBGCP6Q96RT7 1819 aa1.81□□□□□ -2.12
SMC4-219ENST00000487747 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 TET2Q6N021 2002 aaPredicted RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 HSFX4A0A1B0GTS1 333 aaPredicted RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 A0A1B0GWB2 263 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 HSFX3A0A1B0GWH4 333 aaPredicted RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 TGDSO95455 350 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 GIPP09681 153 aaPredicted RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 TSTA3Q13630 321 aaPredicted RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 C11orf88Q6PI97 169 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 C6orf89Q6UWU4 347 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 ZNF621Q6ZSS3 439 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 C6orf120Q7Z4R8 191 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 MFSD6LQ8IWD5 586 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 NKAPP1Q8N9T2 125 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 ZSCAN4Q8NAM6 433 aaPredicted RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 OR8H1Q8NGG4 311 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 M1APQ8TC57 530 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 PAQR8Q8TEZ7 354 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 SLC5A11Q8WWX8 675 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 TIMD4Q96H15 378 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 CELF6Q96J87 481 aaKnown RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 ZNF560Q96MR9 790 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 JAKMIP1Q96N16 626 aaKnown RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 NFKBIZQ9BYH8 718 aa1.8□□□□□ -2.12
SMC4-219ENST00000487747 EIF3LQ9Y262 564 aaKnown RBP1.8□□□□□ -2.12
SMC4-219ENST00000487747 A0A1W2PRV1 198 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 H3BTX0 84 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 CHTF8P0CG12 524 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 SERPINA2P20848 420 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 KRT83P78385 493 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 SLC10A7Q0GE19 358 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 C17orf67Q0P5P2 114 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 FUT7Q11130 342 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 ZNF674Q2M3X9 581 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 PRR9Q5T870 116 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 C1orf146Q5VVC0 180 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 TOM1L2Q6ZVM7 507 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 NRMQ8IXM6 262 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 LINC01561Q8N1V8 128 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 SPATA13Q96N96 652 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 CITED1Q99966 193 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 NACA2Q9H009 215 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 ZWILCHQ9H900 591 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 DMAP1Q9NPF5 467 aaPredicted RBP1.79□□□□□ -2.12
SMC4-219ENST00000487747 HOMER3Q9NSC5 361 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 B3GNT2Q9NY97 397 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 ZNF490Q9ULM2 529 aaPredicted RBP1.79□□□□□ -2.12
SMC4-219ENST00000487747 PLEKHH1Q9ULM0 1364 aa1.79□□□□□ -2.12
SMC4-219ENST00000487747 DHX29Q7Z478 1369 aaKnown RBP1.78□□□□□ -2.12
SMC4-219ENST00000487747 IQANK1A0A1B0GTG1 560 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 ESYT2A0FGR8 921 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 C6orf47O95873 294 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 ALPPP05187 535 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 PTPN6P29350 595 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 SRP54P61011 504 aaKnown RBP1.78□□□□□ -2.12
SMC4-219ENST00000487747 MYBPC1Q00872 1141 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 MEF2BQ02080 365 aaPredicted RBP1.78□□□□□ -2.12
SMC4-219ENST00000487747 NRF1Q16656 503 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 TIGITQ495A1 244 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 GDPD3Q7L5L3 318 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 TMEM185AQ8NFB2 350 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 LINC00477Q96M19 166 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 TSG101Q99816 390 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 KLHDC3Q9BQ90 382 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 ULBP2Q9BZM5 246 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 ZNF430Q9H8G1 570 aaPredicted RBP1.78□□□□□ -2.12
SMC4-219ENST00000487747 TRPV5Q9NQA5 729 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 BCAP29Q9UHQ4 241 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 KIF25Q9UIL4 384 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 GNPTGQ9UJJ9 305 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 TRAPPC4Q9Y296 219 aa1.78□□□□□ -2.12
SMC4-219ENST00000487747 MROH7-TTC4A0A0A0MT08 1334 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 C17orf51A8MQB3 221 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 SS18L1O75177 396 aaPredicted RBP1.77□□□□□ -2.13
SMC4-219ENST00000487747 SLITRK3O94933 977 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 NDUFA7O95182 113 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 CTDNEP1O95476 244 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 GSTT2P0CG29 244 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 GSTT2BP0CG30 244 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 ATP5A1P25705 553 aaKnown RBP1.77□□□□□ -2.13
SMC4-219ENST00000487747 TGFBR3Q03167 851 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 RSPO1Q2MKA7 263 aaPredicted RBP1.77□□□□□ -2.13
SMC4-219ENST00000487747 ARMC3Q5W041 872 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 NEK5Q6P3R8 708 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 FAM159AQ6UWV7 190 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 NPBQ8NG41 125 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 SELENOMQ8WWX9 145 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 PGLYRP4Q96LB8 373 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 DESI2Q9BSY9 194 aa1.77□□□□□ -2.13
SMC4-219ENST00000487747 FTHL17Q9BXU8 183 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms