RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 EFNA2O43921 213 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 CPSF4O95639 269 aaKnown RBP11.1□□□□□ -0.63
SREBF1-215ENST00000487401 AGR2O95994 175 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 YES1P07947 543 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 INHBBP09529 407 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 PRKCAP17252 672 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 SLC1A6P48664 564 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 ZNF844Q08AG5 666 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 SELENBP1Q13228 472 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 QPRTQ15274 297 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 ARHGAP11BQ3KRB8 267 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 EIF3MQ7L2H7 374 aaKnown RBP11.1□□□□□ -0.63
SREBF1-215ENST00000487401 TUSC5Q8IXB3 177 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 CLEC4FQ8N1N0 589 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 SLC43A2Q8N370 569 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 RNF128Q8TEB7 428 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 ZFP90Q8TF47 636 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 ARSGQ96EG1 525 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 PERPQ96FX8 193 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 PAIP2Q9BPZ3 127 aaKnown RBP11.1□□□□□ -0.63
SREBF1-215ENST00000487401 TACO1Q9BSH4 297 aaKnown RBP11.1□□□□□ -0.63
SREBF1-215ENST00000487401 THUMPD3Q9BV44 507 aaKnown RBP11.1□□□□□ -0.63
SREBF1-215ENST00000487401 PARD6BQ9BYG5 372 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 LAT2Q9GZY6 243 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 GP6Q9HCN6 339 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 SSU72Q9NP77 194 aaKnown RBP11.1□□□□□ -0.63
SREBF1-215ENST00000487401 SERINC1Q9NRX5 453 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 KLHL13Q9P2N7 655 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 MKLN1Q9UL63 735 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 VPS13CQ709C8 3753 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 MED12Q93074 2177 aa11.1□□□□□ -0.63
SREBF1-215ENST00000487401 PRSS51A0A1B0GVH4 220 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 FAM171A2A8MVW0 826 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 FCMRO60667 390 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 NTN1O95631 604 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 OR12D1P0DN82 309 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 PSMB1P20618 241 aaKnown RBP11.09□□□□□ -0.63
SREBF1-215ENST00000487401 ENPP1P22413 925 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 UQCRC2P22695 453 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 IL32P24001 234 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
SREBF1-215ENST00000487401 CLNS1AP54105 237 aaKnown RBP11.09□□□□□ -0.63
SREBF1-215ENST00000487401 CASP9P55211 416 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 RAC3P60763 192 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 STX3Q13277 289 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 ZNF141Q15928 474 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 SLC25A53Q5H9E4 307 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 PRSS57Q6UWY2 283 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 CLEC9AQ6UXN8 241 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 ZNF704Q6ZNC4 412 aaPredicted RBP11.09□□□□□ -0.63
SREBF1-215ENST00000487401 NUFIP2Q7Z417 695 aaKnown RBP11.09□□□□□ -0.63
SREBF1-215ENST00000487401 YTHDF3Q7Z739 585 aaKnown RBP11.09□□□□□ -0.63
SREBF1-215ENST00000487401 ANKRD46Q86W74 232 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 KRTAP1-3Q8IUG1 177 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 OR8J2Q8NGG1 315 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 XAGE5Q8WWM1 108 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 TMEM234Q8WY98 164 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 PLPPR2Q96GM1 343 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 OR51I1Q9H343 314 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 SERHL2Q9H4I8 314 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 KLHL9Q9P2J3 617 aa11.09□□□□□ -0.63
SREBF1-215ENST00000487401 ZNF469Q96JG9 3925 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 AKAP6Q13023 2319 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 IGHV3-15A0A0B4J1V0 119 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 A0A1W2PNR3 127 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 UGT2B17O75795 530 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 ADAP00813 363 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 CSTAP01040 98 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 UBTFL6P0CB48 400 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 HOXB4P17483 251 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 LBPP18428 481 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 PGCP20142 388 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 BGNP21810 368 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 CHI3L1P36222 383 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 LTBQ06643 244 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 MERTKQ12866 999 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 P2RY6Q15077 328 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 TIGD2Q4W5G0 525 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 TNFAIP8L2Q6P589 184 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 TFAP2EQ6VUC0 442 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 Q71RC1 249 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 MIPOL1Q8TD10 442 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 TMEM171Q8WVE6 324 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 HSD17B8Q92506 261 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 S100PBPQ96BU1 408 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 Q96MF0 132 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 OR5B2Q96R09 309 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 SMR3AQ99954 134 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 USB1Q9BQ65 265 aaKnown RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 BDH2Q9BUT1 245 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 NUF2Q9BZD4 464 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 ZNF350Q9GZX5 532 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 QRSL1Q9H0R6 528 aaKnown RBP11.08□□□□□ -0.64
SREBF1-215ENST00000487401 CXorf56Q9H5V9 222 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 COQ10BQ9H8M1 238 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 NGBQ9NPG2 151 aa11.08□□□□□ -0.64
SREBF1-215ENST00000487401 POLE3Q9NRF9 147 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms