RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 GLYR1Q49A26 553 aaPredicted RBP4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 HMBOX1Q6NT76 420 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 CYP20A1Q6UW02 462 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 FADS6Q8N9I5 356 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 OR4K14Q8NGD5 310 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 OR14L1PQ8NHC6 308 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 RHEBL1Q8TAI7 183 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 WDR20Q8TBZ3 569 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 RFKQ969G6 155 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 REPS1Q96D71 796 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 TMCO6Q96DC7 493 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 OMA1Q96E52 524 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 PIK3IP1Q96FE7 263 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 PGM2Q96G03 612 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 CFAP36Q96G28 342 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 LRGUKQ96M69 825 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 BTBD9Q96Q07 612 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 MTERF1Q99551 399 aaKnown RBP4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 RBBP8Q99708 897 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 CPNE1Q99829 537 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 ACTRT3Q9BYD9 372 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 SAYSD1Q9NPB0 183 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 SERHLQ9NQF3 203 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 PLSCR4Q9NRQ2 329 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 TMEM160Q9NX00 188 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 MAT2BQ9NZL9 334 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 CD274Q9NZQ7 290 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 ZIM2Q9NZV7 527 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 OPTCQ9UBM4 332 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 HEY2Q9UBP5 337 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 PRODH2Q9UF12 536 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 ASIC3Q9UHC3 531 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 CHMP2BQ9UQN3 213 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 DTX4Q9Y2E6 619 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 ACOT9Q9Y305 439 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 WIF1Q9Y5W5 379 aa4.55□□□□□ -1.68
R3HDM1-218ENST00000487294 IGLV3-32A0A0A0MS00 114 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 C1orf226A1L170 272 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 GOLGA6L10A6NI86 522 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 GLOD5A6NK44 160 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FAM159BA6NKW6 160 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 LINC00473A8K010 186 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SYCE1LA8MT33 242 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SAP18O00422 153 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PHGDHO43175 533 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SEC31AO94979 1220 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 DANCRP0C864 163 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FAM157CP0CG43 387 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 CT45A8P0DMV1 189 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 CT45A9P0DMV2 189 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PCNAP12004 261 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FCGR2AP12318 317 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 CSNK2A2P19784 350 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PSMB1P20618 241 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 IDUAP35475 653 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 GP5P40197 560 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 STARP49675 285 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ZNF134P52741 427 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PNLIPRP2P54317 469 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ALDH18A1P54886 795 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ATP5J2P56134 94 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PLCXD2Q0VAA5 305 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 EFR3AQ14156 821 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 GANABQ14697 944 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FASTKD3Q14CZ7 662 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 CLEC12BQ2HXU8 276 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 CT45A2Q5DJT8 189 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FBXO48Q5FWF7 155 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SLC48A1Q6P1K1 146 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 TMEM108Q6UXF1 575 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ZNF704Q6ZNC4 412 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 EXOC3L1Q86VI1 746 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 RNF175Q8N4F7 328 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SPATA6LQ8N4H0 392 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 METTL25Q8N6Q8 603 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FBXO36Q8NEA4 188 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ZNF675Q8TD23 568 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 DOK4Q8TEW6 326 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ROBO4Q8WZ75 1007 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 C11orf24Q96F05 449 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ZNF845Q96IR2 970 aaPredicted RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 ZNF681Q96N22 645 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SFXN2Q96NB2 322 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 COL21A1Q96P44 957 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FAM111AQ96PZ2 611 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SERPINI1Q99574 410 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PIGQQ9BRB3 760 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SPATA5L1Q9BVQ7 753 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 REG4Q9BYZ8 158 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SHCBP1LQ9BZQ2 653 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 DDX47Q9H0S4 455 aaKnown RBP4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 LRTM1Q9HBL6 345 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 NMRAL1Q9HBL8 299 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SMYD2Q9NRG4 433 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 KLRF1Q9NZS2 232 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 FBXL2Q9UKC9 423 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 SNX12Q9UMY4 172 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 CR1P17927 2039 aa4.54□□□□□ -1.68
R3HDM1-218ENST00000487294 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.54□□□□□ -1.684e-10■■■■□ 20.9
R3HDM1-218ENST00000487294 PRR14LQ5THK1 2151 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms