RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LASP1Q14847 261 aaKnown RBP17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 NDUFAF6Q330K2 333 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 KRTAP24-1Q3LI83 254 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 KLHL26Q53HC5 615 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 CLEC6AQ6EIG7 209 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 C11orf71Q6IPW1 123 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 LRIG3Q6UXM1 1119 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 OR2W6PQ8NHA6 318 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 CLHC1Q8NHS4 586 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 GPR119Q8TDV5 335 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 MUCL1Q96DR8 90 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 CHMP6Q96FZ7 201 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 MRGPRX4Q96LA9 322 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF300Q96RE9 604 aaPredicted RBP17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 KCNK17Q96T54 332 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 STACQ99469 402 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 DUSP22Q9NRW4 184 aa17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 SIRT3Q9NTG7 399 aaPredicted RBP17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZCCHC3Q9NUD5 404 aaKnown RBP17.18■□□□□ 0.34
SMPDL3A-202ENST00000487215 ELOA3DA6NLF2 546 aaPredicted RBP17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 C9JVG2 144 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 SLC28A1O00337 649 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 SMAD9O15198 467 aaKnown RBP17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 HMGN2P05204 90 aaKnown RBP17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 GGT1P19440 569 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 ATP6V1C1P21283 382 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 SLC7A1P30825 629 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 TTKP33981 857 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 DSCR9P59020 149 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 RASGEF1BQ0VAM2 473 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 ELOA3BQ3SY89 546 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 Q6ZSR9 355 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 SSX8Q7RTT4 187 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF527Q8NB42 609 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 ELOA3Q8NG57 546 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 OR2T11Q8NH01 316 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 HTRA1Q92743 480 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF775Q96BV0 537 aaPredicted RBP17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 BEX2Q9BXY8 128 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 PIGUQ9H490 435 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 ANKZF1Q9H8Y5 726 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 CBLN4Q9NTU7 201 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 TMEM160Q9NX00 188 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 DCDC2Q9UHG0 476 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 BAIAP2L1Q9UHR4 511 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 CADP27708 2225 aa17.17■□□□□ 0.34
SMPDL3A-202ENST00000487215 OR5H1A6NKK0 313 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 E7EQL1 145 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 H3BNH8 94 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 RIPK2O43353 540 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 CYTIPO60759 359 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 PGM3O95394 542 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 CASP9P55211 416 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 SPOCK1Q08629 439 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 CFAP157Q5JU67 520 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 P2RY8Q86VZ1 359 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF525Q8N782 197 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 KIF18AQ8NI77 898 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 MZB1Q8WU39 189 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF75CPQ92670 426 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 RADILQ96JH8 1075 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 HOXD1Q9GZZ0 328 aa17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 PSMC3IPQ9P2W1 217 aaPredicted RBP17.16■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF724A8MTY0 619 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 GTPBP1O00178 669 aaKnown RBP17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 H6PDO95479 791 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 PROCP04070 461 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 SLC25A16P16260 332 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 DNAJB13P59910 316 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 RPL38P63173 70 aaKnown RBP17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 MLC1Q15049 377 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 RFTN2Q52LD8 501 aaPredicted RBP17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 ARL13AQ5H913 290 aaPredicted RBP17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 SLC25A53Q5H9E4 307 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 CDC73Q6P1J9 531 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 ZNF433Q8N7K0 673 aaPredicted RBP17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 DHRS9Q9BPW9 319 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 MANSC1Q9H8J5 431 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 LPAR3Q9UBY5 353 aa17.15■□□□□ 0.34
SMPDL3A-202ENST00000487215 NPIPB9F8W1W9 429 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 GLRA3O75311 464 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF16P17020 682 aaPredicted RBP17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 ATP12AP54707 1039 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 QPRTQ15274 297 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 RAB35Q15286 201 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 DCST2Q5T1A1 773 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 SLC22A25Q6T423 547 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 TMEM108Q6UXF1 575 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 B3GLCTQ6Y288 498 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 GALNT5Q7Z7M9 940 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF100Q8IYN0 542 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 MUC15Q8N387 334 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 TMCO5AQ8N6Q1 288 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 ZNF614Q8N883 585 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR5W2Q8NH69 310 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 RFWD2Q8NHY2 731 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 MTERF3Q96E29 417 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 OR5B2Q96R09 309 aa17.14■□□□□ 0.33
SMPDL3A-202ENST00000487215 AMBRA1Q9C0C7 1298 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms