RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 SLC39A3Q9BRY0 314 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 INPP5KQ9BT40 448 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 OPN3Q9H1Y3 402 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-208ENST00000486404 CACYBPQ9HB71 228 aaKnown RBP11.57□□□□□ -0.56
CHMP3-208ENST00000486404 TCF7L2Q9NQB0 619 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 LIPT1Q9Y234 373 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 SLC35A3Q9Y2D2 325 aa11.57□□□□□ -0.56
CHMP3-208ENST00000486404 CENPVL1A0A0U1RR11 272 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 SH3D21A4FU49 640 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 HMGN4O00479 90 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 CTAG2O75638 210 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 UGT2B17O75795 530 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 AQP8O94778 261 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 H6PDO95479 791 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 PABPC4LP0CB38 370 aaKnown RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 NR2F1P10589 423 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 EPXP11678 715 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 POU2F1P14859 743 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 PGCP20142 388 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 IL11P20809 199 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 PSMA4P25789 261 aaKnown RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 CDKN2CP42773 168 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 SLC6A8P48029 635 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 FUT5Q11128 374 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 CTU2Q2VPK5 515 aaKnown RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 C3orf33Q6P1S2 294 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 FRRS1Q6ZNA5 592 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 MSANTD1Q6ZTZ1 278 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 FAM214BQ7L5A3 538 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 BTLAQ7Z6A9 289 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 HMGN2P46Q86SG4 172 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 OR6K3Q8NGY3 331 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 ZNF563Q8TA94 476 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 GPR119Q8TDV5 335 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 ZFP90Q8TF47 636 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 TMEM234Q8WY98 164 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 ST8SIA1Q92185 356 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 CPNE4Q96A23 557 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 STARD4Q96DR4 205 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 GMPPAQ96IJ6 420 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 ITCHQ96J02 903 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 ADGRG7Q96K78 797 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 KLHDC3Q9BQ90 382 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 LAT2Q9GZY6 243 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 VIPAS39Q9H9C1 493 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 SDR39U1Q9NRG7 319 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 INTS9Q9NV88 658 aaKnown RBP11.56□□□□□ -0.56
CHMP3-208ENST00000486404 NDRG3Q9UGV2 375 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 CLEC4AQ9UMR7 237 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 EDARQ9UNE0 448 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 CSMD2Q7Z408 3487 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
CHMP3-208ENST00000486404 A0A0J9YW62 118 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 TMEM247A6NEH6 219 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 A8MXE2 369 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 ZNF195O14628 629 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 CASKO14936 926 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 ADAMDEC1O15204 470 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 SS18L1O75177 396 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 GOSR1O95249 250 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 GUSBP08236 651 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 CD8BP10966 210 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 UQCRBP14927 111 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 CD79BP40259 229 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 KIR2DL2P43627 348 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 CARD18P57730 90 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 PPP2R2AP63151 447 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 MERTKQ12866 999 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 GNA13Q14344 377 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 TOMM34Q15785 309 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 ZNF239Q16600 458 aaKnown RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 EXOC3L2Q2M3D2 409 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 EPGNQ6UW88 154 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 STK32CQ86UX6 486 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 OR9I1Q8NGQ6 314 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 WDR60Q8WVS4 1066 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 OSTF1Q92882 214 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 ARSGQ96EG1 525 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 DACH2Q96NX9 599 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 TRNT1Q96Q11 434 aaKnown RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 MED18Q9BUE0 208 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 SLCO1B3Q9NPD5 702 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 FANCFQ9NPI8 374 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 SERINC1Q9NRX5 453 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 GLRX2Q9NS18 164 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 P2RX2Q9UBL9 471 aa11.55□□□□□ -0.56
CHMP3-208ENST00000486404 SPIN1Q9Y657 262 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-208ENST00000486404 FAM234BA2RU67 622 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 NR5A2O00482 541 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 TGDSO95455 350 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 SHC1P29353 583 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 RYKP34925 604 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 CRATP43155 626 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 CHRNEQ04844 493 aa11.54□□□□□ -0.56
CHMP3-208ENST00000486404 RNPS1Q15287 305 aaKnown RBP11.54□□□□□ -0.56
CHMP3-208ENST00000486404 MAPK14Q16539 360 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms