RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ZGRF1Q86YA3 2104 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 DNAJC13O75165 2243 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 BOD1L1Q8NFC6 3051 aa10.34□□□□□ -0.75
NUP50-216ENST00000486184 GTF3C1Q12789 2109 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 A0A1B0GTH9 108 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 LINC01387J3KSC0 135 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 SYT5O00445 386 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 AQP7O14520 342 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 DNAJC8O75937 253 aaPredicted RBP10.33□□□□□ -0.76
NUP50-216ENST00000486184 IGHG3P01860 377 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 C8BP07358 591 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 GP1BBP13224 206 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 NCK1P16333 377 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 ZNF17P17021 662 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 ME2P23368 584 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 PTGS2P35354 604 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 CASP6P55212 293 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 HSF1Q00613 529 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 QPRTQ15274 297 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 PLPPR5Q32ZL2 321 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 CYBRD1Q53TN4 286 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 GLYATQ6IB77 296 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 ENPP6Q6UWR7 440 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 CLIP4Q8N3C7 705 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 CADM2Q8N3J6 435 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 GPR119Q8TDV5 335 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 ST8SIA1Q92185 356 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 SLC35B4Q969S0 331 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 TAMM41Q96BW9 452 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 TPD52L3Q96J77 140 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 BARD1Q99728 777 aaKnown RBP10.33□□□□□ -0.76
NUP50-216ENST00000486184 MUC13Q9H3R2 512 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.33□□□□□ -0.76
NUP50-216ENST00000486184 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
NUP50-216ENST00000486184 ACAD8Q9UKU7 415 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 SLC9A8Q9Y2E8 581 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 SLC6A5Q9Y345 797 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 SNX13Q9Y5W8 968 aa10.33□□□□□ -0.76
NUP50-216ENST00000486184 OR14I1A6ND48 311 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 NPIPA2E9PIF3 369 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 NPIPA3F8WFD2 350 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 H3BML4 177 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 AP3D1O14617 1153 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 PRRG2O14669 202 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 BCKDKO14874 412 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 TPST1O60507 370 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 BCAS1O75363 584 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 GCM2O75603 506 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 PDE5AO76074 875 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 ACTL6AO96019 429 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 SERPINA1P01009 418 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 TPOP07202 933 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 FESP07332 822 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 GKN3PP0CG01 181 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 POU3F2P20265 443 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 CHMP24386 653 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 HTR3AP46098 478 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 KCNJ5P48544 419 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 IDH2P48735 452 aaKnown RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 GABPB1Q06547 395 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 MERTKQ12866 999 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 EPS8Q12929 822 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 FOXF1Q12946 379 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 CEACAM7Q14002 265 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.32□□□□□ -0.76
NUP50-216ENST00000486184 WLSQ5T9L3 541 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 FKBP9P1Q75LS8 142 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 GALNT11Q8NCW6 608 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 VANGL1Q8TAA9 524 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 ABTB1Q969K4 478 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 MIB2Q96AX9 1013 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 CCDC124Q96CT7 223 aaKnown RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 SLC7A6OSQ96CW6 309 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 MRGPRX4Q96LA9 322 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 LRGUKQ96M69 825 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 NSMCE2Q96MF7 247 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 SERINC1Q9NRX5 453 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 SELENONQ9NZV5 590 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 TESQ9UGI8 421 aaKnown RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 CD300AQ9UGN4 299 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 SAMD4AQ9UPU9 718 aaKnown RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 SH3GLB1Q9Y371 365 aa10.32□□□□□ -0.76
NUP50-216ENST00000486184 SPIN1Q9Y657 262 aaPredicted RBP10.32□□□□□ -0.76
NUP50-216ENST00000486184 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 A0A1B0GVC2 190 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 OR2M5A3KFT3 312 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 C7orf72A4D263 438 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 B4DXG7 233 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 SHISA8B8ZZ34 492 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 M0R3H8 397 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 FAAHO00519 579 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 ARPC2O15144 300 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 FRS3O43559 492 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 ZIC3O60481 467 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 LGI1O95970 557 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 PEPDP12955 493 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 PRKCAP17252 672 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 BMP7P18075 431 aa10.31□□□□□ -0.76
NUP50-216ENST00000486184 CD247P20963 164 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms