RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 PRIM2P49643 509 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 RNF144AP50876 292 aaPredicted RBP16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 LSM12Q3MHD2 195 aaKnown RBP16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 CGB2Q6NT52 195 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 STK32CQ86UX6 486 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 LILRB1Q8NHL6 650 aaPredicted RBP16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 ABHD3Q8WU67 409 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 STON2Q8WXE9 905 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 S100PBPQ96BU1 408 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 PPCDCQ96CD2 204 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 MS4A4EQ96PG1 132 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 TSSK3Q96PN8 268 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 C1orf50Q9BV19 199 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 TCF7L2Q9NQB0 619 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 GLRX2Q9NS18 164 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 ASIC5Q9NY37 505 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 BAIAP2L1Q9UHR4 511 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 GPR52Q9Y2T5 361 aa16.28■□□□□ 0.2
RHBDF1-209ENST00000486045 A0A0G2JND7 137 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 SDC1P18827 310 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 ME2P23368 584 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 MANFP55145 182 aaKnown RBP16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 FOXF1Q12946 379 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 NUFIP2Q7Z417 695 aaKnown RBP16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 CPLX4Q7Z7G2 160 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 ATG4DQ86TL0 474 aaPredicted RBP16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 LILRA2Q8N149 483 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 ZNF619Q8N2I2 560 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 ZFP28Q8NHY6 868 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 ZBED6CLQ96FA7 236 aaPredicted RBP16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 KLHL15Q96M94 604 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 SRXN1Q9BYN0 137 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 REEP4Q9H6H4 257 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 FANCFQ9NPI8 374 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 SH3BP4Q9P0V3 963 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 NTMQ9P121 344 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 KLHL14Q9P2G3 628 aa16.27■□□□□ 0.2
RHBDF1-209ENST00000486045 USF3Q68DE3 2245 aa16.27■□□□□ 0.19
RHBDF1-209ENST00000486045 RNF223E7ERA6 249 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 OIP5O43482 229 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 GCM2O75603 506 aaPredicted RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 SOX30O94993 753 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 SOD3P08294 240 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 LINGO3P0C6S8 592 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 G6PDP11413 515 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 HPGDP15428 266 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 DRD4P21917 467 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 FRKP42685 505 aaPredicted RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 ASMTP46597 345 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 ARFIP2P53365 341 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 CARD18P57730 90 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 RPS4XP62701 263 aaKnown RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 ZNF239Q16600 458 aaKnown RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 PDSS1Q5T2R2 415 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 TFAP2EQ6VUC0 442 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 CXXC5Q7LFL8 322 aaKnown RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 COX18Q8N8Q8 333 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 B4GALNT2Q8NHY0 566 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 RNF128Q8TEB7 428 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 JADE3Q92613 823 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 NEUROG1Q92886 237 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 ZNF764Q96H86 408 aaPredicted RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 TACO1Q9BSH4 297 aaKnown RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 NSRP1Q9H0G5 558 aaKnown RBP16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 OR10A4Q9H209 315 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 UBQLN4Q9NRR5 601 aa16.26■□□□□ 0.19
RHBDF1-209ENST00000486045 SCDO00767 359 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 UBDO15205 165 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 CLOCKO15516 846 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 EFNA2O43921 213 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 TBX19O60806 448 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 TMCC2O75069 709 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 CRLF1O75462 422 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 ALOX5P09917 674 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 ALDOCP09972 364 aaKnown RBP16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 ZNF117Q03924 483 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 SF3A3Q12874 501 aaKnown RBP eCLIP16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 PDE7AQ13946 482 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 VEZF1Q14119 521 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 CLEC12BQ2HXU8 276 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 EXOSC6Q5RKV6 272 aaKnown RBP16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 MTERF4Q7Z6M4 381 aaKnown RBP16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 TUSC5Q8IXB3 177 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 GABRG1Q8N1C3 465 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 STEAP2Q8NFT2 490 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 ELAC2Q9BQ52 826 aaKnown RBP16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 TMEM120AQ9BXJ8 343 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 HHATLQ9HCP6 504 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 GIN1Q9NXP7 522 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 RNF115Q9Y4L5 304 aa16.25■□□□□ 0.19
RHBDF1-209ENST00000486045 NPIPA5A0A0B4J1W7 369 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 NPIPA7E9PJI5 369 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 SHOX2O60902 331 aaPredicted RBP16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 NPIPA8P0DM63 369 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 CDKN1AP38936 164 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 CLDN8P56748 225 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 PTGR1Q14914 329 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 TAB1Q15750 504 aa16.24■□□□□ 0.19
RHBDF1-209ENST00000486045 GSTA3Q16772 222 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms