RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 FAM200BP0CF97 657 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 PTAFRP25105 342 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 AKT2P31751 481 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 KRT20P35900 424 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 NDST1P52848 882 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 ELAVL3Q14576 367 aaKnown RBP3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 KRTAP13-3Q3SY46 172 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 TEX35Q5T0J7 233 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 FAM46CQ5VWP2 391 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 NKAIN2Q5VXU1 208 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 KLHL10Q6JEL2 608 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 ZNF720Q7Z2F6 126 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 HORMAD1Q86X24 394 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 CCDC83Q8IWF9 413 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 CARNMT1Q8N4J0 409 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 ARL10Q8N8L6 244 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 CCL4L1Q8NHW4 92 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 HEXDCQ8WVB3 486 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 NRGNQ92686 78 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 SNRNP40Q96DI7 357 aaKnown RBP3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 TMA16Q96EY4 203 aaKnown RBP3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 CATSPER2Q96P56 530 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 TSSK2Q96PF2 358 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 TIPINQ9BVW5 301 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 PINK1Q9BXM7 581 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 FBXO44Q9H4M3 255 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 GPN2Q9H9Y4 310 aaPredicted RBP3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 PARVGQ9HBI0 331 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 DEPPQ9NTK1 212 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 STOML2Q9UJZ1 356 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 VPS13CQ709C8 3753 aa3.43□□□□□ -1.86
SMARCC1-207ENST00000485833 MEGF8Q7Z7M0 2845 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 IGLON5A6NGN9 336 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 MKRN2OSH3BPM6 223 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 SLC7A4O43246 635 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 LRRTM2O43300 516 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 THY1P04216 161 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 DLATP10515 647 aaKnown RBP3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PDGFRAP16234 1089 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PSMB4P28070 264 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 NAGLUP54802 743 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PFN3P60673 137 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 ST8SIA6P61647 398 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 YWHAGP61981 247 aaKnown RBP eCLIP3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 TNNC1P63316 161 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 MAPK11Q15759 364 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 ZNF506Q5JVG8 444 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 MUC21Q5SSG8 566 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 ATAD3CQ5T2N8 411 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 TXNRD3NBQ6F5E7 133 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PHLDB2Q86SQ0 1253 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 LRRC49Q8IUZ0 686 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 SLC34A3Q8N130 599 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 OCC1Q8TAD7 63 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 FIBINQ8TAL6 211 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 ITLN1Q8WWA0 313 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PATE1Q8WXA2 126 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 CCDC127Q96BQ5 260 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PDXPQ96GD0 296 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 ANKRD36BP1Q96IX9 119 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 SLITRK2Q9H156 845 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 MRGBPQ9NV56 204 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 COMMD8Q9NX08 183 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 B4GALT7Q9UBV7 327 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 ODF2LQ9ULJ1 636 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 CELA1Q9UNI1 258 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 SONP18583 2426 aaKnown RBP3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 PIKFYVEQ9Y2I7 2098 aa3.42□□□□□ -1.86
SMARCC1-207ENST00000485833 NCOA6Q14686 2063 aaPredicted RBP3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 YJEFN3A6XGL0 299 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 E7ENQ6 273 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 H0YCG3 227 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 KPNA3O00505 521 aaPredicted RBP3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 E2F3O00716 465 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 IGLV3-27P01718 113 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 IGHG1P01857 330 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 TNNC2P02585 160 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 THRAP10827 490 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 RALAP11233 206 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 KRT3P12035 628 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 ADRA2CP18825 462 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 TCN2P20062 427 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 KLK2P20151 261 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 CD82P27701 267 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 CD1CP29017 333 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 NPY4RP50391 375 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 POU5F1Q01860 360 aaKnown RBP3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 Q1RN00 199 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 TMEM44Q2T9K0 475 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 ZNF770Q6IQ21 691 aaPredicted RBP3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 WDR49Q8IV35 697 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 BANPQ8N9N5 519 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 OR2A12Q8NGT7 310 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 ITLN2Q8WWU7 325 aaPredicted RBP3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 OR8D1Q8WZ84 308 aa3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 ALKBH3Q96Q83 286 aaPredicted RBP3.41□□□□□ -1.86
SMARCC1-207ENST00000485833 TNFRSF13CQ96RJ3 184 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms