RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RNF130Q86XS8 419 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 CCDC71Q8IV32 467 aaPredicted RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 LIX1Q8N485 282 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 TESCQ96BS2 214 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 WDFY2Q96P53 400 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 TAAR6Q96RI8 345 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 SDHCQ99643 169 aaPredicted RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 EFCAB11Q9BUY7 163 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PITHD1Q9GZP4 211 aaPredicted RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 LRTM1Q9HBL6 345 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PRDM9Q9NQV7 894 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ABI3Q9P2A4 366 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 TBC1D24Q9ULP9 559 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.91□□□□□ -0.82
DDX56-212ENST00000485367 ABCG2Q9UNQ0 655 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 OSGIN2Q9Y236 505 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ASB1Q9Y576 335 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 DIDO1Q9BTC0 2240 aaKnown RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 SLC35F4A4IF30 521 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 MYO1GB0I1T2 1018 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 B3GALT2O43825 422 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 SEMA3DO95025 777 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 DDAH2O95865 285 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 EPORP19235 508 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 CD22P20273 847 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 S100A3P33764 101 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ARL1P40616 181 aaPredicted RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 AP2S1P53680 142 aaPredicted RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 CLDN8P56748 225 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PCDH1Q08174 1060 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 IRF3Q14653 427 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PTGR1Q14914 329 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 CBLL1Q75N03 491 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 SLC5A8Q8N695 610 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 WDR34Q96EX3 536 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 RNF170Q96K19 258 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 C5orf34Q96MH7 638 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 CDK15Q96Q40 435 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 F2RL3Q96RI0 385 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 UTP23Q9BRU9 249 aaKnown RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 RHNO1Q9BSD3 238 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 IPPKQ9H8X2 491 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 SERHLQ9NQF3 203 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 ANKRD10Q9NXR5 420 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 PLEKHB1Q9UF11 243 aaPredicted RBP9.91□□□□□ -0.82
DDX56-212ENST00000485367 SLC5A6Q9Y289 635 aa9.91□□□□□ -0.82
DDX56-212ENST00000485367 DOPEY1Q5JWR5 2465 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 IGKV3D-11A0A0A0MRZ8 115 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 TCRBV16S1A1N1A0A5B0 115 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 A1L4Q6 167 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ULK1O75385 1050 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ZNF682O95780 498 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 TBX6O95947 436 aaPredicted RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 ADORA3P0DMS8 318 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 IL7P13232 177 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 ZNF10P21506 573 aaPredicted RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 MAPK1P28482 360 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ERP29P30040 261 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 PIK3CGP48736 1102 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 PLIN5Q00G26 463 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 GALK2Q01415 458 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 SRSF11Q05519 484 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 TGM3Q08188 693 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 VEZF1Q14119 521 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 TBRG1Q3YBR2 411 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ZNF766Q5HY98 468 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ARMC4Q5T2S8 1044 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 C10orf62Q5T681 223 aaPredicted RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 HIST2H2BCQ6DN03 193 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 TRIM40Q6P9F5 258 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 NRARPQ7Z6K4 114 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 RPS19BP1Q86WX3 136 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 PLCZ1Q86YW0 608 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ZZZ3Q8IYH5 903 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 OR2L5Q8NG80 312 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 GGHQ92820 318 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 QRFPRQ96P65 431 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 TRNT1Q96Q11 434 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 COQ7Q99807 217 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 NTMT1Q9BV86 223 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 CDCA4Q9BXL8 241 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 SLC22A4Q9H015 551 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 CDCP1Q9H5V8 836 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 C12orf4Q9NQ89 552 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 RPRD1BQ9NQG5 326 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 RASSF1Q9NS23 344 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ACOXLQ9NUZ1 547 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 THUMPD1Q9NXG2 353 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 CNOT2Q9NZN8 540 aaKnown RBP9.9□□□□□ -0.82
DDX56-212ENST00000485367 TNFRSF10DQ9UBN6 386 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ENOPH1Q9UHY7 261 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 ATPIF1Q9UII2 106 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 SNX6Q9UNH7 406 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 MMACHCQ9Y4U1 282 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 PCDHGB3Q9Y5G1 929 aa9.9□□□□□ -0.82
DDX56-212ENST00000485367 LOC100506127A0A0U1RQW1 187 aa9.89□□□□□ -0.83
DDX56-212ENST00000485367 MEIOCA2RUB1 952 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms