RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 DHDDSQ86SQ9 333 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 VRK2Q86Y07 508 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 LILRA2Q8N149 483 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 WNT2BQ93097 391 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 RAD21L1Q9H4I0 556 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 IKZF5Q9H5V7 419 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 TMEM45AQ9NWC5 275 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 STOML1Q9UBI4 398 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 LEF1Q9UJU2 399 aaPredicted RBP14.6□□□□□ -0.07
DDR1-246ENST00000485023 NDUFAF1Q9Y375 327 aa14.6□□□□□ -0.07
DDR1-246ENST00000485023 GPC6Q9Y625 555 aaPredicted RBP14.6□□□□□ -0.07
DDR1-246ENST00000485023 PCNX1Q96RV3 2341 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 AP3D1O14617 1153 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 EFNA2O43921 213 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 CXCL13O43927 109 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 IL7RP16871 459 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 CTSSP25774 331 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 UQCRC1P31930 480 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 MAGEA8P43361 318 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 RAC1P63000 192 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 SIRPAP78324 504 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 GCNT6Q5T4J0 391 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 METTL21CQ5VZV1 264 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 ZNF836Q6ZNA1 936 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 RETREG3Q86VR2 466 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 PEX5LQ8IYB4 626 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 METTL25Q8N6Q8 603 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 CNEP1R1Q8N9A8 125 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 FAM71CQ8NEG0 241 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 OR52P1PQ8NH57 321 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 OR10D3Q8NH80 312 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 OR2V1Q8NHB1 315 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 ZNF563Q8TA94 476 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 KLHL15Q96M94 604 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 TREX2Q9BQ50 279 aaPredicted RBP14.59□□□□□ -0.07
DDR1-246ENST00000485023 MTHFD2LQ9H903 347 aaPredicted RBP14.59□□□□□ -0.07
DDR1-246ENST00000485023 DNAJB12Q9NXW2 375 aaKnown RBP14.59□□□□□ -0.07
DDR1-246ENST00000485023 CALML5Q9NZT1 146 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 ARHGAP21Q5T5U3 1957 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 PCNX3Q9H6A9 2034 aa14.59□□□□□ -0.07
DDR1-246ENST00000485023 TRBV5-3A0A0A0MS03 114 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 A0A0J9YW62 118 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 C5orf58C9J3I9 102 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 ADAM11O75078 769 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 RCBTB2O95199 551 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 DBIP07108 87 aaKnown RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 PRF1P14222 555 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 PGCP20142 388 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 RPS4Y1P22090 263 aaKnown RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 ELK4P28324 431 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 SLC6A8P48029 635 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 SESN3P58005 492 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 MERTKQ12866 999 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 FADDQ13158 208 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 NFYCQ13952 458 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 GNA13Q14344 377 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 CAPRIN1Q14444 709 aaKnown RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 CTU2Q2VPK5 515 aaKnown RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 MRPL2Q5T653 305 aaKnown RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 HBMQ6B0K9 141 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 DLEU7Q6UYE1 221 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 LUZP2Q86TE4 346 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 MCEMP1Q8IX19 187 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 NFKBIDQ8NI38 313 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 OIT3Q8WWZ8 545 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 ADGRG7Q96K78 797 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 MRGPRX4Q96LA9 322 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 ZNF317Q96PQ6 595 aaPredicted RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 UCN2Q96RP3 112 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 CPPED1Q9BRF8 314 aaPredicted RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 PRRG4Q9BZD6 226 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 CACYBPQ9HB71 228 aaKnown RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 A4GALTQ9NPC4 353 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 RLIMQ9NVW2 624 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 KLHL14Q9P2G3 628 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 ZNF629Q9UEG4 869 aaPredicted RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 ZNF443Q9Y2A4 671 aaPredicted RBP14.58□□□□□ -0.08
DDR1-246ENST00000485023 DSPPQ9NZW4 1301 aa14.58□□□□□ -0.08
DDR1-246ENST00000485023 AQP8O94778 261 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 NTN1O95631 604 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 NID1P14543 1247 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 PPIBP23284 216 aaKnown RBP14.57□□□□□ -0.08
DDR1-246ENST00000485023 OPRM1P35372 400 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 ASCL1P50553 236 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 GYS2P54840 703 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 MTPNP58546 118 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 KLF10Q13118 480 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 SELPLGQ14242 412 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 TMEM176BQ3YBM2 270 aaPredicted RBP14.57□□□□□ -0.08
DDR1-246ENST00000485023 LIN52Q52LA3 116 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 ESPNLQ6ZVH7 1005 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 C10orf82Q8WW14 230 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 DNAJA3Q96EY1 480 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 FAM107BQ9H098 131 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 SAR1AQ9NR31 198 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 THUMPD1Q9NXG2 353 aaKnown RBP14.57□□□□□ -0.08
DDR1-246ENST00000485023 CLEC4AQ9UMR7 237 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 ZNF175Q9Y473 711 aa14.57□□□□□ -0.08
DDR1-246ENST00000485023 A0A1W2PNR3 127 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms