RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 TMEM109Q9BVC6 243 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 NGBQ9NPG2 151 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF264O43296 627 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 CNOT4O95628 575 aaKnown RBP10.19□□□□□ -0.78
SCFD1-206ENST00000484733 NUDT14O95848 222 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 ETV4P43268 484 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 HBA1P69905 142 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 CBFBQ13951 182 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 NCMAPQ5T1S8 102 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 MIPOL1Q8TD10 442 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 S100PBPQ96BU1 408 aa10.19□□□□□ -0.78
SCFD1-206ENST00000484733 SERINC4A6NH21 518 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 RNASET2O00584 256 aaKnown RBP10.18□□□□□ -0.78
SCFD1-206ENST00000484733 TYROBPO43914 113 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 UBL4AP11441 157 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 MATN1P21941 496 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 OR3A2P47893 321 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 QPRTQ15274 297 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 ARHGAP11BQ3KRB8 267 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 SSX8Q7RTT4 187 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 C6orf120Q7Z4R8 191 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 LILRB1Q8NHL6 650 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-206ENST00000484733 AGR3Q8TD06 166 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 NUDT8Q8WV74 236 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 ST8SIA1Q92185 356 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 AKAP1Q92667 903 aaKnown RBP eCLIP10.18□□□□□ -0.78
SCFD1-206ENST00000484733 TUBGCP3Q96CW5 907 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 NOP53Q9NZM5 478 aaKnown RBP10.18□□□□□ -0.78
SCFD1-206ENST00000484733 KLHL9Q9P2J3 617 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 ING1Q9UK53 422 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-206ENST00000484733 TRIM64A6NGJ6 449 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 TRIM64BA6NI03 449 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF724A8MTY0 619 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 OVOL3O00110 214 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 CFLARO15519 480 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 CYTIPO60759 359 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 G6PDP11413 515 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 IFFO1Q0D2I5 559 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 HEPHL1Q6MZM0 1159 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 LRRC34Q8IZ02 419 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 OR8J2Q8NGG1 315 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF524Q96C55 264 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 PSD2Q9BQI7 771 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 SERHL2Q9H4I8 314 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 POLE3Q9NRF9 147 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.18□□□□□ -0.78
SCFD1-206ENST00000484733 RNF115Q9Y4L5 304 aa10.18□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF814B7Z6K7 855 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 STX11O75558 287 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SKAP2O75563 359 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SNUPNO95149 360 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 AGR2O95994 175 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 ADAP00813 363 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 IL32P24001 234 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 RPS4XP62701 263 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SKP2Q13309 424 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 ITGADQ13349 1161 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 CAPRIN1Q14444 709 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 PDK3Q15120 406 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 NDUFAF6Q330K2 333 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 PDZK1Q5T2W1 519 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 C3orf33Q6P1S2 294 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 Q6ZT83 130 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 OR5D16Q8NGK9 328 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 PIWIL2Q8TC59 973 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 AENQ8WTP8 325 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 POTEKPQ9BYX7 375 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 ZNF350Q9GZX5 532 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 ESRP2Q9H6T0 727 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 ACER3Q9NUN7 267 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 KCNE5Q9UJ90 142 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 MAP1AP78559 2803 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 NIPBLQ6KC79 2804 aaeCLIP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 VPS13CQ709C8 3753 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 CD3EP07766 207 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 ENPP1P22413 925 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SLC7A1P30825 629 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 VSNL1P62760 191 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 TAB1Q15750 504 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 EMBQ6PCB8 327 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SEZ6L2Q6UXD5 910 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 BHLHA15Q7RTS1 189 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 NUDCD3Q8IVD9 361 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 FAM71CQ8NEG0 241 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 OR5AK3PQ8NH89 298 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 RAB3IL1Q8TBN0 382 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 TMEM234Q8WY98 164 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 KISS1RQ969F8 398 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 TRIM44Q96DX7 344 aaPredicted RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SLC35G5Q96KT7 338 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 THUMPD3Q9BV44 507 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SAP130Q9H0E3 1048 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SSU72Q9NP77 194 aaKnown RBP10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SERINC1Q9NRX5 453 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 EXD2Q9NVH0 621 aa10.17□□□□□ -0.78
SCFD1-206ENST00000484733 SMAD7O15105 426 aaKnown RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SMAD9O15198 467 aaKnown RBP10.16□□□□□ -0.78
SCFD1-206ENST00000484733 BIRC5O15392 142 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 SCN2BO60939 215 aa10.16□□□□□ -0.78
SCFD1-206ENST00000484733 UGT2B17O75795 530 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms