RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 EMBQ6PCB8 327 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 BIVMQ86UB2 503 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 TPRA1Q86W33 373 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 SERPINA9Q86WD7 417 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 BBOF1Q8ND07 529 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 OR2T33Q8NG76 320 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 OR4D9Q8NGE8 314 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 MAIP1Q8WWC4 291 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 ST8SIA1Q92185 356 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 EFHD2Q96C19 240 aaPredicted RBP3.63□□□□□ -1.83
VPS13A-211ENST00000484581 CITED1Q99966 193 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 SLC35A5Q9BS91 424 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 CHCHD5Q9BSY4 110 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 TRIM62Q9BVG3 475 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 HCAR1Q9BXC0 346 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 BARHL1Q9BZE3 327 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 RHBGQ9H310 441 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 TUBB1Q9H4B7 451 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 AZI2Q9H6S1 392 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 VCPKMTQ9H867 229 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 NUDT15Q9NV35 164 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 NUDT4Q9NZJ9 180 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 USP16Q9Y5T5 823 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 TTC41PQ6P2S7 1318 aa3.63□□□□□ -1.83
VPS13A-211ENST00000484581 USP6P35125 1406 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 GOLGA6L7A0A1B0GV03 622 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ACOD1A6NK06 481 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 HAS3O00219 553 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CTAG2O75638 210 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 POP4O95707 220 aaKnown RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 AP2A1O95782 977 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CGAP01215 116 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 KRT6AP02538 564 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CFC1BP0CG36 223 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CFC1P0CG37 223 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ATP1B2P14415 290 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ETS2P15036 469 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 YWHABP31946 246 aaKnown RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 RFC4P35249 363 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ACVR1BP36896 505 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ETV5P41161 510 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 MAP3K8P41279 467 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CRYBB2P43320 205 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CSRP3P50461 194 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 PRELPP51888 382 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 PUDPQ08623 228 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 BST2Q10589 180 aaKnown RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ST3GAL3Q11203 375 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 PPP1R7Q15435 360 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 KLHL38Q2WGJ6 581 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 C2CD6Q53TS8 623 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 SPANXN2Q5MJ10 180 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 C9orf66Q5T8R8 295 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF57Q68EA5 555 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 RNASEKQ6P5S7 137 aaKnown RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 TMUB2Q71RG4 321 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 TRIM69Q86WT6 500 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 KIR3DL3Q8N743 410 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CEP112Q8N8E3 955 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 C4orf32Q8N8J7 132 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 OR6C4Q8NGE1 309 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 TRUB1Q8WWH5 349 aaKnown RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 MCUR1Q96AQ8 359 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF597Q96LX8 424 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CHP1Q99653 195 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 OPRPNQ99935 248 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 TM2D1Q9BX74 207 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 SLITRK2Q9H156 845 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 OPN3Q9H1Y3 402 aaPredicted RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 JPT2Q9H910 190 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 NEK6Q9HC98 313 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 SENP1Q9P0U3 644 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 CTSZQ9UBR2 303 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 PSME2Q9UL46 239 aa3.62□□□□□ -1.83
VPS13A-211ENST00000484581 SAMD4AQ9UPU9 718 aaKnown RBP3.62□□□□□ -1.83
VPS13A-211ENST00000484581 ATP10AO60312 1499 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 FRG2CA6NGY1 282 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 NCF1BA6NI72 391 aaPredicted RBP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 NCF1CA8MVU1 366 aaPredicted RBP3.61□□□□□ -1.83
VPS13A-211ENST00000484581 A8MXK9 166 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 WRBO00258 174 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 RNF13O43567 381 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 SERPINB2P05120 415 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 CT45A10P0DMU9 189 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 MCF2P10911 925 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 SERPINA2P20848 420 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 GCAP28676 217 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 NF2P35240 595 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 SYKP43405 635 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 GYG1P46976 350 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ALDH3B2P48448 385 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ARHGDIBP52566 201 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 VLDLRP98155 873 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 PPP1R3AQ16821 1122 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 MICAQ29983 383 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 CAVIN4Q5BKX8 364 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 XKR7Q5GH72 579 aa3.61□□□□□ -1.83
VPS13A-211ENST00000484581 ZNF506Q5JVG8 444 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms