RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RNF130Q86XS8 419 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF619Q8N2I2 560 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 DPP10Q8N608 796 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 B4GALNT2Q8NHY0 566 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 RFWD2Q8NHY2 731 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 MBD3L2Q8NHZ7 208 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-213ENST00000484112 XAGE5Q8WWM1 108 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 VPS33AQ96AX1 596 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 Q96MF0 132 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 SFXN2Q96NB2 322 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 ZFP3Q96NJ6 502 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF317Q96PQ6 595 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-213ENST00000484112 INPP5KQ9BT40 448 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 TMEM120AQ9BXJ8 343 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 MTHFD2LQ9H903 347 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-213ENST00000484112 CALHM2Q9HA72 323 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 SLC52A3Q9NQ40 469 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 FGFR1OP2Q9NVK5 253 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 FBXO34Q9NWN3 711 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 PAQR5Q9NXK6 330 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-213ENST00000484112 GALNT8Q9NY28 637 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 FLRT3Q9NZU0 649 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 JKAMPQ9P055 326 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 C6orf203Q9P0P8 240 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-213ENST00000484112 P2RX2Q9UBL9 471 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 LEF1Q9UJU2 399 aaPredicted RBP9.01□□□□□ -0.97
CPSF4-213ENST00000484112 SLC35A3Q9Y2D2 325 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 NDUFAF1Q9Y375 327 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 WDR45Q9Y484 360 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 AP4B1Q9Y6B7 739 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 KCNE3Q9Y6H6 103 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 KIAA1549Q9HCM3 1950 aa9.01□□□□□ -0.97
CPSF4-213ENST00000484112 SERINC4A6NH21 518 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 C9JVG2 144 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 NR5A2O00482 541 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 ANGPT2O15123 496 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF264O43296 627 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 DNAJA2O60884 412 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 UGT2B17O75795 530 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 GOSR1O95249 250 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 IL18BPO95998 194 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 NPPAP01160 153 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 GSNP06396 782 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF708P17019 499 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 HOXB9P17482 250 aaPredicted RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 ELK4P28324 431 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 P2RX1P51575 399 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 MVDP53602 400 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 CRISP3P54108 245 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 PPP2R2BQ00005 443 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 STX5Q13190 355 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 MAPRE2Q15555 327 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 TMEM44Q2T9K0 475 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 OR5M10Q6IEU7 315 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 TNFAIP8L2Q6P589 184 aaPredicted RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 EIF3MQ7L2H7 374 aaKnown RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 YTHDF3Q7Z739 585 aaKnown RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 ZAR1Q86SH2 424 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 CLEC4FQ8N1N0 589 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 GTPBP8Q8N3Z3 284 aaPredicted RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 PHOSPHO1Q8TCT1 267 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 INTS12Q96CB8 462 aaKnown RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 OTUB1Q96FW1 271 aaPredicted RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 COX4I2Q96KJ9 171 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 RTN4RQ9BZR6 473 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 PAIP1Q9H074 479 aaKnown RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 EXOSC3Q9NQT5 275 aaKnown RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 MED11Q9P086 117 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 NDRG3Q9UGV2 375 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 ICAM5Q9UMF0 924 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 PCDHB14Q9Y5E9 798 aa9□□□□□ -0.97
CPSF4-213ENST00000484112 NUP214P35658 2090 aaPredicted RBP9□□□□□ -0.97
CPSF4-213ENST00000484112 TRIM64A6NGJ6 449 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 TRIM64BA6NI03 449 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 AGAP5A6NIR3 686 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 BBIP1A8MTZ0 92 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 EVPLLA8MZ36 301 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 H0Y3Z8 333 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 GTPBP1O00178 669 aaKnown RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 CLIC1O00299 241 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 ETV2O00321 342 aaPredicted RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 HCRTR2O43614 444 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 FCMRO60667 390 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 DBIP07108 87 aaKnown RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 TFPTP0C1Z6 253 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 NR2F1P10589 423 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 UBL4AP11441 157 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 FKBP2P26885 142 aaKnown RBP8.99□□□□□ -0.97
CPSF4-213ENST00000484112 CPOXP36551 454 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 CRATP43155 626 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 LHX2P50458 406 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 B3GALT5-AS1P59052 145 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 DSTNP60981 165 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 ZNF117Q03924 483 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 CBFBQ13951 182 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 FGFBP1Q14512 234 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 RGNQ15493 299 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 GPR68Q15743 365 aa8.99□□□□□ -0.97
CPSF4-213ENST00000484112 GPAT3Q53EU6 434 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms