RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SVOPQ8N4V2 548 aa24.1■■□□□ 1.45
SHOX2-204ENST00000483851 POGLUT1Q8NBL1 392 aa24.1■■□□□ 1.45
SHOX2-204ENST00000483851 OR5L2Q8NGL0 311 aa24.1■■□□□ 1.45
SHOX2-204ENST00000483851 DNAJA4Q8WW22 397 aaPredicted RBP24.1■■□□□ 1.45
SHOX2-204ENST00000483851 MR1Q95460 341 aa24.1■■□□□ 1.45
SHOX2-204ENST00000483851 FAM46AQ96IP4 442 aaKnown RBP24.1■■□□□ 1.45
SHOX2-204ENST00000483851 ACOT13Q9NPJ3 140 aa24.1■■□□□ 1.45
SHOX2-204ENST00000483851 FLRT3Q9NZU0 649 aa24.1■■□□□ 1.45
SHOX2-204ENST00000483851 IGHV3-20A0A0C4DH32 117 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 UBL4AP11441 157 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 ABCD3P28288 659 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 SMSP52788 366 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 COPZ1P61923 177 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 INSM1Q01101 510 aaPredicted RBP24.09■■□□□ 1.45
SHOX2-204ENST00000483851 SPCS2Q15005 226 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 CSRP2Q16527 193 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 TMEM236Q5W0B7 351 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 PTCHD4Q6ZW05 846 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 CDK20Q8IZL9 346 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 OR8J1Q8NGP2 316 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 TEX47Q8TBZ9 253 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 OSTF1Q92882 214 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 OMA1Q96E52 524 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 IL20Q9NYY1 176 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 SELENONQ9NZV5 590 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 RPS6KB2Q9UBS0 482 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 MED31Q9Y3C7 131 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 OR6C70A6NIJ9 312 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 BCL10O95999 233 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 RNF144AP50876 292 aaPredicted RBP24.09■■□□□ 1.45
SHOX2-204ENST00000483851 CTBP2P56545 445 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 ISXQ2M1V0 245 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 LINC00114Q6XXX2 140 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 CCDC103Q8IW40 242 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 Q96MT0 163 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 DDA1Q9BW61 102 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 PRRG3Q9BZD7 231 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 NRSN2Q9GZP1 204 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 CNIH4Q9P003 139 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 PSORS1C1Q9UIG5 152 aa24.09■■□□□ 1.45
SHOX2-204ENST00000483851 ALG1L2C9J202 215 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 ZNF264O43296 627 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 FOXD2O60548 495 aaPredicted RBP24.08■■□□□ 1.45
SHOX2-204ENST00000483851 ADAM11O75078 769 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 FOXL2P58012 376 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 NCF4Q15080 339 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 ALG10BQ5I7T1 473 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 WDR88Q6ZMY6 472 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 TMPRSS11FQ6ZWK6 438 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 MRGPREQ86SM8 312 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 CROCCP3Q8IVE0 287 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 AKIRIN1Q9H9L7 192 aaPredicted RBP24.08■■□□□ 1.45
SHOX2-204ENST00000483851 CLN6Q9NWW5 311 aa24.08■■□□□ 1.45
SHOX2-204ENST00000483851 HTR3EA5X5Y0 456 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 PRKNO60260 465 aaPredicted RBP24.07■■□□□ 1.44
SHOX2-204ENST00000483851 NAGAP17050 411 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 SLC26A5P58743 744 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 SPEM2Q0P670 501 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 SKP2Q13309 424 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 EFR3AQ14156 821 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 MOGQ16653 247 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 TMEM201Q5SNT2 666 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 SLC25A30Q5SVS4 291 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 SLC27A4Q6P1M0 643 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 RAB11FIP2Q7L804 512 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 KIF18BQ86Y91 864 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 TAAR9Q96RI9 348 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 POLDIP3Q9BY77 421 aaKnown RBP24.07■■□□□ 1.44
SHOX2-204ENST00000483851 LAT2Q9GZY6 243 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 ICOSLGO75144 302 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 SLC6A8P48029 635 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 EIF3IQ13347 325 aaKnown RBP24.07■■□□□ 1.44
SHOX2-204ENST00000483851 GINS1Q14691 196 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 UBE2UQ5VVX9 321 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 RPL13AP3Q6NVV1 102 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 PHOSPHO1Q8TCT1 267 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 TEX12Q9BXU0 123 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 B3GALT1Q9Y5Z6 326 aa24.07■■□□□ 1.44
SHOX2-204ENST00000483851 CDC14CA4D256 554 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 GTPBP1O00178 669 aaKnown RBP24.06■■□□□ 1.44
SHOX2-204ENST00000483851 TNFRSF10AO00220 468 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 EIF4E2O60573 245 aaKnown RBP24.06■■□□□ 1.44
SHOX2-204ENST00000483851 IGFBP1P08833 259 aaPredicted RBP24.06■■□□□ 1.44
SHOX2-204ENST00000483851 CD226Q15762 336 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 PRR22Q8IZ63 422 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 OR2Y1Q8NGV0 311 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 PMEPA1Q969W9 287 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 CDH10Q9Y6N8 788 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 VPS13AQ96RL7 3174 aa24.06■■□□□ 1.44
SHOX2-204ENST00000483851 CLCA1A8K7I4 914 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 FADS2O95864 444 aaKnown RBP24.05■■□□□ 1.44
SHOX2-204ENST00000483851 IGHEP01854 428 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 MLLT10P55197 1068 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 ZNF829Q3KNS6 432 aaPredicted RBP24.05■■□□□ 1.44
SHOX2-204ENST00000483851 WBP2NLQ6ICG8 309 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 APOOLQ6UXV4 268 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 ZNF620Q6ZNG0 422 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 AHSA2Q719I0 299 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 GRHL3Q8TE85 626 aa24.05■■□□□ 1.44
SHOX2-204ENST00000483851 MYDGFQ969H8 173 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms