RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 RAC3P60763 192 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 PHC1P78364 1004 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 SLC25A3Q00325 362 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 HSPB3Q12988 150 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 RASA2Q15283 850 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 GABRA6Q16445 453 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 UNC50Q53HI1 259 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 FBXW9Q5XUX1 488 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 ANKRD26P1Q6NSI1 321 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 GPRIN3Q6ZVF9 776 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 GALNT5Q7Z7M9 940 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 MISPQ8IVT2 679 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 UBE2J2Q8N2K1 259 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 MMGT1Q8N4V1 131 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 C3orf56Q8N813 242 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 SGMS2Q8NHU3 365 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 FBXO25Q8TCJ0 367 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 GIMAP5Q96F15 307 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 C16orf58Q96GQ5 468 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 MRGPRX4Q96LA9 322 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 TRMOQ9BU70 441 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 OCEL1Q9H607 264 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 HHATLQ9HCP6 504 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 SIRT5Q9NXA8 310 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 ICAM5Q9UMF0 924 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 NFU1Q9UMS0 254 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 CARD8Q9Y2G2 431 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 FKBP7Q9Y680 259 aa9.52□□□□□ -0.89
SMARCC1-205ENST00000483847 NPIPA5A0A0B4J1W7 369 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 CCT8L1PA6NM43 557 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 NPIPA7E9PJI5 369 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 RAD51CO43502 376 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 RGS9O75916 674 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 SUPT7LO94864 414 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 SLU7O95391 586 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 NPIPA8P0DM63 369 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 GSTM5P46439 218 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 COMPP49747 757 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 VPS26BQ4G0F5 336 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 SPDYAQ5MJ70 313 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 ZDHHC24Q6UX98 284 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 RINLQ6ZS11 566 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 CDRT4Q8N9R6 151 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 WDR31Q8NA23 367 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 OR6Y1Q8NGX8 325 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 PHOSPHO1Q8TCT1 267 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 GPR119Q8TDV5 335 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 CIDECQ96AQ7 238 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 ZMYND19Q96E35 227 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 EGLN2Q96KS0 407 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 MUS81Q96NY9 551 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 OR5B2Q96R09 309 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF382Q96SR6 550 aa9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 VRK1Q99986 396 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 MRPL57Q9BQC6 102 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 MRPL46Q9H2W6 279 aaKnown RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 POLR3HQ9Y535 204 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
SMARCC1-205ENST00000483847 FAM187AA6NFU0 413 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF716A6NP11 495 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 KIF2AO00139 706 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 ITGA5P08648 1049 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 IFI6P09912 130 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 P2RX1P51575 399 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 ACTG1P63261 375 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 SELENBP1Q13228 472 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 MLC1Q15049 377 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 ZSWIM7Q19AV6 140 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 TSNAXIP1Q2TAA8 658 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 C9orf135Q5VTT2 229 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 SZRD1Q7Z422 152 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 LSRQ86X29 649 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 COX18Q8N8Q8 333 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 NUP43Q8NFH3 380 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 APH1AQ96BI3 265 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 TMEM237Q96Q45 408 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 QRSL1Q9H0R6 528 aaKnown RBP9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 METTL17Q9H7H0 456 aaPredicted RBP9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 FKRPQ9H9S5 495 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 ASB6Q9NWX5 421 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 GIN1Q9NXP7 522 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 METRNQ9UJH8 293 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 MOKQ9UQ07 419 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 ACTL7BQ9Y614 415 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 SAR1BQ9Y6B6 198 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 TRRAPQ9Y4A5 3859 aa9.5□□□□□ -0.89
SMARCC1-205ENST00000483847 IGKV3D-15A0A087WSY6 115 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 LILRA1O75019 489 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 APEX1P27695 318 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 LCN1P31025 176 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 GPC1P35052 558 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 SERPINB4P48594 390 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 DIO1P49895 249 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 FOXA1P55317 472 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 SNRPD2P62316 118 aaKnown RBP9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 PDLIM3Q53GG5 364 aaPredicted RBP9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 KLHL26Q53HC5 615 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 ZNF385BQ569K4 471 aa9.49□□□□□ -0.89
SMARCC1-205ENST00000483847 SLC25A53Q5H9E4 307 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms