RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CLN6Q9NWW5 311 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 OCIAD1Q9NX40 245 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 CLEC2DQ9UHP7 191 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 ENPP5Q9UJA9 477 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 SH3D21A4FU49 640 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 GNB5O14775 395 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 OIP5O43482 229 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 MPZL2O60487 215 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 FMO6PO60774 539 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 SOX30O94993 753 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 APOL3O95236 402 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 GUSBP08236 651 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 ANKRD34CP0C6C1 535 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 ADORA3P0DMS8 318 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 CKMT1AP12532 417 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 IFNA8P32881 189 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 TGFBR2P37173 567 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 IFNGR2P38484 337 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 IRF3Q14653 427 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 ELAVL1Q15717 326 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 TBCEQ15813 527 aaPredicted RBP8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 SNAPC1Q16533 368 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC27A4Q6P1M0 643 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 MRGPREQ86SM8 312 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 STX19Q8N4C7 294 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 FAM26EQ8N5C1 309 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR7G1Q8NGA0 311 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 RAB2BQ8WUD1 216 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 MYDGFQ969H8 173 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 GAL3ST4Q96RP7 486 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 ADOQ96SZ5 270 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 CTRCQ99895 268 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 G6PC3Q9BUM1 346 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 TSSK6Q9BXA6 273 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 POLDIP3Q9BY77 421 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 SIDT1Q9NXL6 827 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 PRODH2Q9UF12 536 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 TESQ9UGI8 421 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 AKAP13Q12802 2813 aa8.13□□□□□ -1.11
CDC42SE1-204ENST00000483763 SYNDIG1LA6NDD5 238 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SERINC4A6NH21 518 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 MRPS14O60783 128 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CNOT3O75175 753 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 DBTP11182 482 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 IFI30P13284 250 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CD53P19397 219 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CCNA2P20248 432 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 TBXA2RP21731 343 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 GRK5P34947 590 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 RORAP35398 523 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PPICP45877 212 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 GPR143P51810 404 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SMSP52788 366 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF91Q05481 1191 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 EBPQ15125 230 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PLAG1Q6DJT9 500 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF613Q6PF04 617 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PAQR6Q6TCH4 344 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 KIRREL2Q6UWL6 708 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 HSDL2Q6YN16 418 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 C16orf47Q6ZP98 133 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 LSMEM1Q8N8F7 131 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 TEX47Q8TBZ9 253 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 VMP1Q96GC9 406 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SAMD8Q96LT4 415 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLC46A1Q96NT5 459 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PRRX2Q99811 253 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PELOQ9BRX2 385 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF426Q9BUY5 554 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 GPN2Q9H9Y4 310 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 MKKSQ9NPJ1 570 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 NCDNQ9UBB6 729 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 KHNYNO15037 678 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SCRG1O75711 98 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 GABARAPO95166 117 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 WISP1O95388 367 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CSTAP01040 98 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CDK4P11802 303 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 TGM1P22735 817 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ST13P50502 369 aaKnown RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 GAS1P54826 345 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 NCS1P62166 190 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 BIKQ13323 160 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 FHL1Q13642 323 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 OCLNQ16625 522 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 NKAIN1Q4KMZ8 207 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SOWAHCQ53LP3 525 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ALG10BQ5I7T1 473 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PHF19Q5T6S3 580 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 FNDC7Q5VTL7 733 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SLITRK4Q8IW52 837 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 CADM2Q8N3J6 435 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 SVOPQ8N4V2 548 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 TOR1AIP2Q8NFQ8 470 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 OR13C2Q8NGS9 318 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PMEPA1Q969W9 287 aa8.12□□□□□ -1.11
CDC42SE1-204ENST00000483763 PPP1R14BQ96C90 147 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms