RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 PIWIL2Q8TC59 973 aaKnown RBP12.32□□□□□ -0.44
VARS-226ENST00000483275 GPR119Q8TDV5 335 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 UBLCP1Q8WVY7 318 aaPredicted RBP12.32□□□□□ -0.44
VARS-226ENST00000483275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.32□□□□□ -0.44
VARS-226ENST00000483275 ZNF764Q96H86 408 aaPredicted RBP12.32□□□□□ -0.44
VARS-226ENST00000483275 GATA5Q9BWX5 397 aaPredicted RBP12.32□□□□□ -0.44
VARS-226ENST00000483275 TIGARQ9NQ88 270 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 ACSS1Q9NUB1 689 aaPredicted RBP12.32□□□□□ -0.44
VARS-226ENST00000483275 DNAJC15Q9Y5T4 150 aa12.32□□□□□ -0.44
VARS-226ENST00000483275 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.32□□□□□ -0.442e-7■■■□□ 14.8
VARS-226ENST00000483275 IGHV4-30-2A0A087WSY4 118 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 SHISA9B4DS77 424 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 GTPBP1O00178 669 aaKnown RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 PIP5K1BO14986 540 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 SCAMP2O15127 329 aaKnown RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 SMAD9O15198 467 aaKnown RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 CD5LO43866 347 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 SSX4O60224 188 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 PRKD3O94806 890 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 C6orf47O95873 294 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 IGHV3-9P01782 118 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 YES1P07947 543 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 PABPC4LP0CB38 370 aaKnown RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 NEFHP12036 1026 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 SLC7A1P30825 629 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 HPCAL1P37235 193 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 EIF1P41567 113 aaKnown RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 P2RX1P51575 399 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 ITGADQ13349 1161 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 PTGR1Q14914 329 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 QPRTQ15274 297 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 CCDC153Q494R4 210 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 SPDYE7PQ495Y7 208 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 GTF2IRD2BQ6EKJ0 949 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 GTF2IRD2Q86UP8 949 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 CLEC4FQ8N1N0 589 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 KRTCAP2Q8N6L1 136 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 TWIST2Q8WVJ9 160 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 HSD17B8Q92506 261 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 HS6ST2Q96MM7 605 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 OR5B2Q96R09 309 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 PSD2Q9BQI7 771 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 MECRQ9BV79 373 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 PIGUQ9H490 435 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 DUSP22Q9NRW4 184 aa12.31□□□□□ -0.44
VARS-226ENST00000483275 HEATR1Q9H583 2144 aaKnown RBP12.31□□□□□ -0.44
VARS-226ENST00000483275 A0A1W2PR80 420 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 COPEO14579 308 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 ABCD4O14678 606 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 TMCC2O75069 709 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 CYP7B1O75881 506 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 IGHV1-2P23083 117 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 SOAT1P35610 550 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 OR3A2P47893 321 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 CASP9P55211 416 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 RASGEF1BQ0VAM2 473 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 SELENBP1Q13228 472 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 PPA1Q15181 289 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 PDZK1Q5T2W1 519 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 TDRPQ86YL5 185 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 STACQ99469 402 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 HDHD5Q9BXW7 423 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 IQCGQ9H095 443 aaKnown RBP12.3□□□□□ -0.44
VARS-226ENST00000483275 SERHL2Q9H4I8 314 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 NGBQ9NPG2 151 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 GPATCH2Q9NW75 528 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
VARS-226ENST00000483275 ATP6V1HQ9UI12 483 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 GPC6Q9Y625 555 aaPredicted RBP12.3□□□□□ -0.44
VARS-226ENST00000483275 ANK2Q01484 3957 aa12.3□□□□□ -0.44
VARS-226ENST00000483275 MALRD1Q5VYJ5 2156 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 GJE1A6NN92 205 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 NPIPB9F8W1W9 429 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 H3BQF6 201 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 PEX11AO75192 247 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 BCAS1O75363 584 aaPredicted RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 SKAP2O75563 359 aaPredicted RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 RAD51DO75771 328 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 FESP07332 822 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 THBS1P07996 1170 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 UBL4AP11441 157 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 KRT4P19013 534 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 LCN1P31025 176 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 CRHR1P34998 444 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ASMTP46597 345 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 P2RY6Q15077 328 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ETFDHQ16134 617 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ZCCHC12Q6PEW1 402 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 DNM1P46Q6ZS02 220 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ZCCHC23Q6ZST2 131 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 Q6ZT83 130 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 MTERF4Q7Z6M4 381 aaKnown RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 HMGN2P46Q86SG4 172 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ZNF527Q8NB42 609 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ADAMTS15Q8TE58 950 aa12.29□□□□□ -0.44
VARS-226ENST00000483275 ZNF75CPQ92670 426 aaPredicted RBP12.29□□□□□ -0.44
VARS-226ENST00000483275 METTL2AQ96IZ6 378 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms