RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 LIPHQ8WWY8 451 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 BPIFA2Q96DR5 249 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ELMO2Q96JJ3 720 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 LURAP1Q96LR2 239 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ZNF578Q96N58 590 aaPredicted RBP2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 TRNT1Q96Q11 434 aaKnown RBP2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 COPS8Q99627 209 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 IL12RB2Q99665 862 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 KCNS3Q9BQ31 491 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 TTYH2Q9BSA4 534 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 TMEM175Q9BSA9 504 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ANKRD60Q9BZ19 345 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 STRADBQ9C0K7 418 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ADNPQ9H2P0 1102 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 S100A14Q9HCY8 104 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 GDF3Q9NR23 364 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 NUDT15Q9NV35 164 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 IL20Q9NYY1 176 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 STOX2Q9P2F5 926 aaPredicted RBP2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 GHRLQ9UBU3 117 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 TUBGCP4Q9UGJ1 667 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ELF5Q9UKW6 265 aaPredicted RBP2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 POMT2Q9UKY4 750 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 PACSIN2Q9UNF0 486 aaPredicted RBP2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ABCG2Q9UNQ0 655 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 C15orf41Q9Y2V0 281 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 FKBP7Q9Y680 259 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 MAD1L1Q9Y6D9 718 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 PHLPP2Q6ZVD8 1323 aa2.35□□□□□ -2.03
LAPTM4A-202ENST00000483117 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 A0A1W2PPV4 95 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 LOC390937A0A1W2PQ73 354 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 GSTTP1A0A1W2PQM5 241 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 FBLL1A6NHQ2 334 aaKnown RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 LRRC30A6NM36 301 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 GABRR3A8MPY1 467 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 PDLIM1O00151 329 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ABCD4O14678 606 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 DUX1O43812 170 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 KIAA0513O60268 411 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 DFNA5O60443 496 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 CRTAPO75718 401 aaPredicted RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 H6PDO95479 791 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 FGF19O95750 216 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 MBP02144 154 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 MT-ND2P03891 347 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 SERPIND1P05546 499 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 TPM3P06753 285 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 IGFBP1P08833 259 aaPredicted RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 H2BFMP0C1H6 154 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 PRPS2P11908 318 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 EIF2S2P20042 333 aaKnown RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 PGCP20142 388 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 KLK2P20151 261 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 TPSB2P20231 275 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 TBXA2RP21731 343 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 GLRA1P23415 457 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 RORAP35398 523 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 CSNK1EP49674 416 aaKnown RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 CDH6P55285 790 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 DCDC1P59894 354 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 NAAAQ02083 359 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 DHODHQ02127 395 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 CNTN1Q12860 1018 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ZNF177Q13360 481 aaPredicted RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 COTL1Q14019 142 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ANGPT1Q15389 498 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 TPSAB1Q15661 275 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 DUSP5Q16690 384 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 MS4A18Q3C1V0 323 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 HIKESHIQ53FT3 197 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 SFT2D3Q587I9 215 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 AGBL2Q5U5Z8 902 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 MLIPQ5VWP3 458 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 OR4F3Q6IEY1 312 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 RHBDD2Q6NTF9 364 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 LEG1Q6P5S2 330 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 CCDC80Q76M96 950 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 C5orf24Q7Z6I8 188 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 MOB3BQ86TA1 216 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ACOT1Q86TX2 421 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 TPRA1Q86W33 373 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 TMEM17Q86X19 198 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 LRRC49Q8IUZ0 686 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ST13P4Q8IZP2 240 aaPredicted RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 GABRG1Q8N1C3 465 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 PARP8Q8N3A8 854 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 LINC00469Q8N7U9 141 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 GATSQ8NAP1 163 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 STXBP6Q8NFX7 210 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 OR10A7Q8NGE5 316 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 OR5T2Q8NGG2 359 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 LRRC20Q8TCA0 184 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 SCFD1Q8WVM8 642 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 FAM3CQ92520 227 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ELMO1Q92556 727 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 RAB1CQ92928 201 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 SLC35C1Q96A29 364 aa2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 ZNF274Q96GC6 653 aaPredicted RBP2.34□□□□□ -2.03
LAPTM4A-202ENST00000483117 CYYR1Q96J86 154 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms