RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 PSD2Q9BQI7 771 aa11.31□□□□□ -0.6
TMEM54-206ENST00000482771 BTBD2Q9BX70 525 aa11.31□□□□□ -0.6
TMEM54-206ENST00000482771 GIN1Q9NXP7 522 aa11.31□□□□□ -0.6
TMEM54-206ENST00000482771 ICAM5Q9UMF0 924 aa11.31□□□□□ -0.6
TMEM54-206ENST00000482771 MGAT4BQ9UQ53 548 aa11.31□□□□□ -0.6
TMEM54-206ENST00000482771 GPC6Q9Y625 555 aaPredicted RBP11.31□□□□□ -0.6
TMEM54-206ENST00000482771 HEATR1Q9H583 2144 aaKnown RBP11.3□□□□□ -0.6
TMEM54-206ENST00000482771 NPIPA5A0A0B4J1W7 369 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 GOLGA8QA0A0J9YX86 632 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 GOLGA8OA6NCC3 632 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 OR5H1A6NKK0 313 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 NPIPA7E9PJI5 369 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 GOLGA8NF8WBI6 632 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 GOLGA8RI6L899 631 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
TMEM54-206ENST00000482771 NPIPA8P0DM63 369 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 PRKCAP17252 672 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 EFNA1P20827 205 aaPredicted RBP11.3□□□□□ -0.6
TMEM54-206ENST00000482771 P2RX1P51575 399 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 KLHL26Q53HC5 615 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 ZNF385BQ569K4 471 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 ARL13AQ5H913 290 aaPredicted RBP11.3□□□□□ -0.6
TMEM54-206ENST00000482771 C8orf74Q6P047 294 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 ZCCHC12Q6PEW1 402 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 TMEM108Q6UXF1 575 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 IL17RELQ6ZVW7 336 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 MTERF4Q7Z6M4 381 aaKnown RBP11.3□□□□□ -0.6
TMEM54-206ENST00000482771 DEPDC4Q8N2C3 294 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 OR52N5Q8NH56 324 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 RFWD2Q8NHY2 731 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 C10orf105Q8TEF2 133 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 IFT81Q8WYA0 676 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 PROX1Q92786 737 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 PPCDCQ96CD2 204 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 MS4A4EQ96PG1 132 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 C1QTNF6Q9BXI9 259 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 HOXD1Q9GZZ0 328 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 TSPYL1Q9H0U9 437 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 BAIAP2L1Q9UHR4 511 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 CCL27Q9Y4X3 112 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 ACTL7BQ9Y614 415 aa11.3□□□□□ -0.6
TMEM54-206ENST00000482771 ANK2Q01484 3957 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 A0A087WUV0 522 aaPredicted RBP11.29□□□□□ -0.6
TMEM54-206ENST00000482771 A0A1W2PR80 420 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 CIB4A0PJX0 185 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 SLC35F4A4IF30 521 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 CCT8L1PA6NM43 557 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 ZNF724A8MTY0 619 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 H3BNH8 94 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 CYTIPO60759 359 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 HSPA4LO95757 839 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 IGHV3-9P01782 118 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 GSTA1P08263 222 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 ZNF16P17020 682 aaPredicted RBP11.29□□□□□ -0.6
TMEM54-206ENST00000482771 ATP6V1C1P21283 382 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 PTAFRP25105 342 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 CD40P25942 277 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 SPOCK1Q08629 439 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 NDUFAF6Q330K2 333 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 KLHL17Q6TDP4 642 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 GALNT5Q7Z7M9 940 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 UBE2J2Q8N2K1 259 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 ZNF527Q8NB42 609 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 CDS1Q92903 461 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 MRGPRX4Q96LA9 322 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 OR5B2Q96R09 309 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 ANKZF1Q9H8Y5 726 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 TNFRSF12AQ9NP84 129 aa11.29□□□□□ -0.6
TMEM54-206ENST00000482771 ACSS1Q9NUB1 689 aaPredicted RBP11.29□□□□□ -0.6
TMEM54-206ENST00000482771 LOC100289279A0A1B0GTE1 492 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 EXOC1LA0A1B0GW35 172 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 M0R1B8 84 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 SMAD9O15198 467 aaKnown RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 ZNF500O60304 480 aaPredicted RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 TBX19O60806 448 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 RAD51DO75771 328 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 LY6HO94772 140 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 HMGN2P05204 90 aaKnown RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 COX5AP20674 150 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 IGFBP5P24593 272 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 FRKP42685 505 aaPredicted RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 GZMKP49863 264 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 EFNA4P52798 201 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 SUMO3P55854 103 aaPredicted RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 LASP1Q14847 261 aaKnown RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 EXOSC6Q5RKV6 272 aaKnown RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 FAM120AOSQ5T036 256 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 FBXW9Q5XUX1 488 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 B3GLCTQ6Y288 498 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 LCA5Q86VQ0 697 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 CLHC1Q8NHS4 586 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 FAM120BQ96EK7 910 aaKnown RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 METTL2AQ96IZ6 378 aaKnown RBP11.28□□□□□ -0.6
TMEM54-206ENST00000482771 TSSK3Q96PN8 268 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 PIGUQ9H490 435 aa11.28□□□□□ -0.6
TMEM54-206ENST00000482771 DUSP22Q9NRW4 184 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms