RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SELENBP1Q13228 472 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 GUSBP1Q15486 140 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 TOMM34Q15785 309 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-213ENST00000482192 MAPK14Q16539 360 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 SLC25A53Q5H9E4 307 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 VWA1Q6PCB0 445 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 DNAJC14Q6Y2X3 702 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-213ENST00000482192 FRRS1Q6ZNA5 592 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 BTLAQ7Z6A9 289 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 FAM71CQ8NEG0 241 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 OR9I1Q8NGQ6 314 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 PNPT1Q8TCS8 783 aaKnown RBP10.66□□□□□ -0.7
HMGN1-213ENST00000482192 TMEM234Q8WY98 164 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 ST8SIA1Q92185 356 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 GMPPAQ96IJ6 420 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-213ENST00000482192 THUMPD3Q9BV44 507 aaKnown RBP10.66□□□□□ -0.7
HMGN1-213ENST00000482192 TIGARQ9NQ88 270 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 GLRX2Q9NS18 164 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 EMC9Q9Y3B6 208 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 CRYBG3Q68DQ2 2970 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 ITPR2Q14571 2701 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 CACNA1DQ01668 2161 aa10.66□□□□□ -0.7
HMGN1-213ENST00000482192 UQCRHLA0A096LP55 91 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 PRAMEF27A3QJZ7 478 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 A6NNC1 897 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 ETV2O00321 342 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 EFNA2O43921 213 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 SS18L1O75177 396 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 PABPC4LP0CB38 370 aaKnown RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 EPXP11678 715 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 PGCP20142 388 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 SHC1P29353 583 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 PGM1P36871 562 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 AQP5P55064 265 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 CARD18P57730 90 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 KCNJ10P78508 379 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 CHRNEQ04844 493 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 DAZAP2Q15038 168 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 COX20Q5RI15 118 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 C6orf10Q5SRN2 563 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 GTF2IRD2BQ6EKJ0 949 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 GTF2IRD2Q86UP8 949 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 LURAP1LQ8IV03 231 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 CMIPQ8IY22 773 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 ANKFN1Q8N957 763 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 ZFP90Q8TF47 636 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 PMM1Q92871 262 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 OSTF1Q92882 214 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 CPNE4Q96A23 557 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 VPS33AQ96AX1 596 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 REXO5Q96IC2 774 aaKnown RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 DACH2Q96NX9 599 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 EBF4Q9BQW3 602 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 SLC39A3Q9BRY0 314 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 CCDC28BQ9BUN5 200 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 POLDIP3Q9BY77 421 aaKnown RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 CLEC4MQ9H2X3 399 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 EXOSC3Q9NQT5 275 aaKnown RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 RASSF1Q9NS23 344 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 SLC6A13Q9NSD5 602 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 DNAJB12Q9NXW2 375 aaKnown RBP10.65□□□□□ -0.7
HMGN1-213ENST00000482192 ELOVL5Q9NYP7 299 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 PROCRQ9UNN8 238 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 FBN2P35556 2912 aa10.65□□□□□ -0.7
HMGN1-213ENST00000482192 FAM221AA4D161 298 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 SH3D21A4FU49 640 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 AGAP5A6NIR3 686 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 GOSR1O95249 250 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 CGAP01215 116 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 CHRM4P08173 479 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 NR2F1P10589 423 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 SLC7A1P30825 629 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 CD79BP40259 229 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 CRATP43155 626 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 MVDP53602 400 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 CTBP2P56545 445 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 IRX1P78414 480 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 GNA13Q14344 377 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 SYPL1Q16563 259 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 ZNF239Q16600 458 aaKnown RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 TMEM176BQ3YBM2 270 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 C3orf33Q6P1S2 294 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 LRRC74BQ6ZQY2 392 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 HMGN2P46Q86SG4 172 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 ARFGAP2Q8N6H7 521 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 ATP6V1C2Q8NEY4 427 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 OR6K3Q8NGY3 331 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 LINC01560Q8TB33 94 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 RNF128Q8TEB7 428 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 CKAP2Q8WWK9 683 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 ZNF524Q96C55 264 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 ZG16BQ96DA0 208 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 MAGEB18Q96M61 343 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 GPATCH1Q9BRR8 931 aaKnown RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 QRSL1Q9H0R6 528 aaKnown RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 OPN3Q9H1Y3 402 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 SLC38A1Q9H2H9 487 aa10.64□□□□□ -0.71
HMGN1-213ENST00000482192 MTHFD2LQ9H903 347 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-213ENST00000482192 TPT1P8Q9HAU6 139 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms