RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GCKP35557 465 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 CHI3L1P36222 383 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-210ENST00000482158 PPT1P50897 306 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 AP3M2P53677 418 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 TAF7Q15545 349 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-210ENST00000482158 TFAP2EQ6VUC0 442 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 C16orf62Q7Z3J2 963 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 ACOT1Q86TX2 421 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 VASH2Q86V25 355 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 IPMKQ8NFU5 416 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 PAQR8Q8TEZ7 354 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 NUS1Q96E22 293 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 PLEKHF1Q96S99 279 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 OMDQ99983 421 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 TEX13BQ9BXU2 312 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 CRNKL1Q9BZJ0 848 aaKnown RBP4.01□□□□□ -1.77
SF3B1-210ENST00000482158 EHD1Q9H4M9 534 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 ABCG2Q9UNQ0 655 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 WDR45Q9Y484 360 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 ALG6Q9Y672 507 aa4.01□□□□□ -1.77
SF3B1-210ENST00000482158 A8MU10 97 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 SULT2B1O00204 365 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 HDAC3O15379 428 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 ADCY5O95622 1261 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 H2BFMP0C1H6 154 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 DNAH10OSP0CZ25 163 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 PSMB1P20618 241 aaKnown RBP4□□□□□ -1.77
SF3B1-210ENST00000482158 HNF1AP20823 631 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 PSMA5P28066 241 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 OTX2P32243 289 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 RGRP47804 291 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 RPS8P62241 208 aaKnown RBP4□□□□□ -1.77
SF3B1-210ENST00000482158 ZNF79Q15937 498 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 SPATA46Q5T0L3 261 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 ATF7IP2Q5U623 682 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 RSBN1Q5VWQ0 802 aaPredicted RBP4□□□□□ -1.77
SF3B1-210ENST00000482158 LIPNQ5VXI9 398 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 CATSPER1Q8NEC5 780 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 FGGYQ96C11 551 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 PELI1Q96FA3 418 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 C16orf74Q96GX8 76 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 TECTBQ96PL2 329 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 SRXN1Q9BYN0 137 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 RHBGQ9H310 441 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 RAB18Q9NP72 206 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 ERVW-1Q9UQF0 538 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 RASD1Q9Y272 281 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 TNRQ92752 1358 aa4□□□□□ -1.77
SF3B1-210ENST00000482158 SMIM28A0A1B0GU29 152 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 MBLAC1A4D2B0 266 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 NPIPA7E9PJI5 369 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 K7N7A8 449 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 NPIPA8P0DM63 369 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 AQP1P29972 269 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 NMT1P30419 496 aaKnown RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 P2RY1P47900 373 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 HSPA2P54652 639 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 STX17P56962 302 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 CBX1P83916 185 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 ELAVL3Q14576 367 aaKnown RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 C14orf178Q8N769 122 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 ANKFN1Q8N957 763 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 OR10A7Q8NGE5 316 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 SLC5A11Q8WWX8 675 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 CTNNBL1Q8WYA6 563 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 SH3YL1Q96HL8 342 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 MS4A14Q96JA4 679 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 AIPL1Q9NZN9 384 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 WARS2Q9UGM6 360 aaKnown RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 UBQLN1Q9UMX0 589 aaKnown RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 NPIPA1Q9UND3 350 aa3.99□□□□□ -1.77
SF3B1-210ENST00000482158 ZNF256Q9Y2P7 627 aaPredicted RBP3.99□□□□□ -1.77
SF3B1-210ENST00000482158 IGHV7-81A0A0B4J1V7 117 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 K7EQM0 130 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 KIAA0754O94854 1291 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 TIMP1P01033 207 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 EPHX2P34913 555 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 LYZP61626 148 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 RPS14P62263 151 aaKnown RBP3.98□□□□□ -1.77
SF3B1-210ENST00000482158 TP53I3Q53FA7 332 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 TTC23Q5W5X9 447 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 HSD17B13Q7Z5P4 300 aaPredicted RBP3.98□□□□□ -1.77
SF3B1-210ENST00000482158 TPRA1Q86W33 373 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 STXBP6Q8NFX7 210 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 LINC01006Q8NI28 216 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 NEIL2Q969S2 332 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 SENP8Q96LD8 212 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 TTC25Q96NG3 672 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 ZNF607Q96SK3 696 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 TXN2Q99757 166 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 ZNF670Q9BS34 389 aa3.98□□□□□ -1.77
SF3B1-210ENST00000482158 POLR1EQ9GZS1 481 aaKnown RBP3.98□□□□□ -1.77
SF3B1-210ENST00000482158 NXF5Q9H1B4 397 aaKnown RBP3.98□□□□□ -1.77
SF3B1-210ENST00000482158 MRPS33Q9Y291 106 aaKnown RBP3.98□□□□□ -1.77
SF3B1-210ENST00000482158 FAM231BA6NCW3 169 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 VSTM2BA6NLU5 285 aa3.97□□□□□ -1.77
SF3B1-210ENST00000482158 KIF2AO00139 706 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-210ENST00000482158 PRRG1O14668 218 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms