RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 SLC38A7Q9NVC3 462 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 GNG12Q9UBI6 72 aa2.92□□□□□ -1.94
SMC6-208ENST00000481708 MRTO4Q9UKD2 239 aaKnown RBP2.92□□□□□ -1.94
SMC6-208ENST00000481708 PIEZO1Q92508 2521 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PDZD2O15018 2839 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 GAGE12BA1L429 117 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 GAGE12HA6NDE8 117 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 POC1B-GALNT4F8VUJ3 575 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CYTH3O43739 400 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 OR2J3O76001 311 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 DARSP14868 501 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 MYOD1P15172 320 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ARSBP15848 533 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 AXLP30530 894 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PLP1P60201 277 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PIGHQ14442 188 aaPredicted RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 ASPRV1Q53RT3 343 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ALG10Q5BKT4 473 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ARMCX4Q5H9R4 360 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ALG10BQ5I7T1 473 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PAGE2BQ5JRK9 111 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PAQR6Q6TCH4 344 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 UNQ6126/PRO20091Q6UXV3 157 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 KCTD8Q6ZWB6 473 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 LGI2Q8N0V4 545 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 MAPKAPK5-AS1Q8N8E1 139 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 OR51L1Q8NGJ5 315 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 OR1F12Q8NHA8 337 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 MITD1Q8WV92 249 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 EXTL1Q92935 676 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 S1PR3Q99500 378 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PARD6BQ9BYG5 372 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 MTIF3Q9H2K0 278 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 THSD1Q9NS62 852 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PACSIN3Q9UKS6 424 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 TIMM10BQ9Y5J6 103 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CLUHO75153 1309 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ASPDHA6ND91 283 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 FBLL1A6NHQ2 334 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 MDM4O15151 490 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SCN2BO60939 215 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SFTPBP07988 381 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CDH5P33151 784 aaPredicted RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 PTGS2P35354 604 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 MPLP40238 635 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 BDKRB1P46663 353 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 GLIPR1P48060 266 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CDH12P55289 794 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 RAG2P55895 527 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SKP1P63208 163 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CDK16Q00536 496 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 TFF2Q03403 129 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 EEF1A2Q05639 463 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 CCDC173Q0VFZ6 552 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 FOXI1Q12951 378 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 TIGD2Q4W5G0 525 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 EARS2Q5JPH6 523 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 DCAF12Q5T6F0 453 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SCYL2Q6P3W7 929 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 FAM122BQ7Z309 247 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PAQR7Q86WK9 346 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PTOV1Q86YD1 416 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 DND1Q8IYX4 353 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 WDR36Q8NI36 951 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 ACMSDQ8TDX5 336 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 TMEM37Q8WXS4 190 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SMPDL3AQ92484 453 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SMG7Q92540 1137 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 NXPE2Q96DL1 559 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 MBOAT4Q96T53 435 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 EPHA6Q9UF33 1036 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ZNF229Q9UJW7 825 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ANAPC7Q9UJX3 599 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PILRBQ9UKJ0 227 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CA5BQ9Y2D0 317 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 TNFRSF18Q9Y5U5 241 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 MED19A0JLT2 244 aaPredicted RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 POLR1CO15160 346 aaPredicted RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 SLC28A2O43868 658 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CHST1O43916 411 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CDK14O94921 469 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CAVIN2O95810 425 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 ERCC1P07992 297 aaPredicted RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 HPCAL1P37235 193 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 UBE2G2P60604 165 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CEACAM7Q14002 265 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 AARS2Q5JTZ9 985 aaKnown RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 CLLU1OSQ5K130 101 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 NEPROQ6NW34 567 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PNCKQ6P2M8 343 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CYS1Q717R9 158 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SCD5Q86SK9 330 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 PROKR2Q8NFJ6 384 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 OR13C3Q8NGS6 347 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 CCDC12Q8WUD4 166 aaPredicted RBP2.91□□□□□ -1.94
SMC6-208ENST00000481708 C10orf35Q96D05 121 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 OMDQ99983 421 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 SH2D3AQ9BRG2 576 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 BDH2Q9BUT1 245 aa2.91□□□□□ -1.94
SMC6-208ENST00000481708 STAP1Q9ULZ2 295 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms