RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ADH6P28332 368 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 SLC7A1P30825 629 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 PTH2RP49190 550 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 MAD2L1Q13257 205 aaPredicted RBP13.58□□□□□ -0.24
LIMS3-203ENST00000480744 QPRTQ15274 297 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 GPR68Q15743 365 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 PDCD2Q16342 344 aaPredicted RBP13.58□□□□□ -0.24
LIMS3-203ENST00000480744 PDZK1Q5T2W1 519 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 OR4F3Q6IEY1 312 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 BHLHB9Q6PI77 547 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 PRSS57Q6UWY2 283 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 C6orf120Q7Z4R8 191 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 NUDCD3Q8IVD9 361 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 RIMKLAQ8IXN7 391 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 CLECL1Q8IZS7 167 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF619Q8N2I2 560 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 TOR1AIP2Q8NFQ8 470 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 STEAP2Q8NFT2 490 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 ZFP90Q8TF47 636 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 S100PBPQ96BU1 408 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 SLC35G5Q96KT7 338 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 TACO1Q9BSH4 297 aaKnown RBP13.58□□□□□ -0.24
LIMS3-203ENST00000480744 COQ10BQ9H8M1 238 aa13.58□□□□□ -0.24
LIMS3-203ENST00000480744 NOP53Q9NZM5 478 aaKnown RBP13.58□□□□□ -0.24
LIMS3-203ENST00000480744 RNF103-CHMP3A0A140T963 221 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 NPIPB9F8W1W9 429 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 PRKD3O94806 890 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 MATN1P21941 496 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 ENPP1P22413 925 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 CASP9P55211 416 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 EMX2Q04743 252 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 SELENBP1Q13228 472 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 CBFBQ13951 182 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 OLIG3Q7RTU3 272 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 OR4A15Q8NGL6 344 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 OR5W2Q8NH69 310 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 ARSGQ96EG1 525 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 MRGPRX4Q96LA9 322 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 SDF2Q99470 211 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 GSX2Q9BZM3 304 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 OR10A4Q9H209 315 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 SERHL2Q9H4I8 314 aa13.57□□□□□ -0.24
LIMS3-203ENST00000480744 SERINC4A6NH21 518 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 HS3ST1O14792 307 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 CLOCKO15516 846 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 ITM2AO43736 263 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 TYROBPO43914 113 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 EIF4E2O60573 245 aaKnown RBP13.56□□□□□ -0.24
LIMS3-203ENST00000480744 GCM2O75603 506 aaPredicted RBP13.56□□□□□ -0.24
LIMS3-203ENST00000480744 ADAP00813 363 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 ETV4P43268 484 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 CLDN8P56748 225 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 CAPRIN1Q14444 709 aaKnown RBP13.56□□□□□ -0.24
LIMS3-203ENST00000480744 CHI3L2Q15782 390 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 TNFAIP8L3Q5GJ75 292 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 CEP85LQ5SZL2 805 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 C16orf62Q7Z3J2 963 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 GABRG1Q8N1C3 465 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF781Q8N8C0 355 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 RAB3IL1Q8TBN0 382 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.24
LIMS3-203ENST00000480744 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF524Q96C55 264 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 OR5B2Q96R09 309 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 THUMPD3Q9BV44 507 aaKnown RBP13.56□□□□□ -0.24
LIMS3-203ENST00000480744 HDHD5Q9BXW7 423 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 QRSL1Q9H0R6 528 aaKnown RBP13.56□□□□□ -0.24
LIMS3-203ENST00000480744 CXorf56Q9H5V9 222 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 MKLN1Q9UL63 735 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 PCDHGB4Q9UN71 923 aa13.56□□□□□ -0.24
LIMS3-203ENST00000480744 TLN2Q9Y4G6 2542 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 CENPVL1A0A0U1RR11 272 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 DUXAA6NLW8 204 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 C9JVG2 144 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 FCMRO60667 390 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 STX11O75558 287 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 CNOT4O95628 575 aaKnown RBP13.55□□□□□ -0.24
LIMS3-203ENST00000480744 CPSF4O95639 269 aaKnown RBP13.55□□□□□ -0.24
LIMS3-203ENST00000480744 AK1P00568 194 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 CSTAP01040 98 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 SERPINE1P05121 402 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 YES1P07947 543 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 NID1P14543 1247 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 C21orf58P58505 322 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 TIGD2Q4W5G0 525 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 SFRP5Q5T4F7 317 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 ANKRD46Q86W74 232 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 SLC43A2Q8N370 569 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF611Q8N823 705 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 KISS1RQ969F8 398 aaPredicted RBP13.55□□□□□ -0.24
LIMS3-203ENST00000480744 ZNF775Q96BV0 537 aaPredicted RBP13.55□□□□□ -0.24
LIMS3-203ENST00000480744 TMEM204Q9BSN7 226 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 DPY30Q9C005 99 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 NMUR2Q9GZQ4 415 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 OR51I1Q9H343 314 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 AKTIPQ9H8T0 292 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 GP6Q9HCN6 339 aa13.55□□□□□ -0.24
LIMS3-203ENST00000480744 EXD2Q9NVH0 621 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms