RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 SAP130Q9H0E3 1048 aa13.46□□□□□ -0.25
TDP2-205ENST00000480495 KCNE5Q9UJ90 142 aa13.46□□□□□ -0.25
TDP2-205ENST00000480495 WDR45Q9Y484 360 aa13.46□□□□□ -0.25
TDP2-205ENST00000480495 SPG11Q96JI7 2443 aa13.46□□□□□ -0.25
TDP2-205ENST00000480495 UQCRHLA0A096LP55 91 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 DNAJA2O60884 412 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 SLC22A3O75751 556 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 CSTAP01040 98 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 IL6P05231 212 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 POU2F1P14859 743 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 SFTPDP35247 375 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 KCNJ5P48544 419 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 CCR4P51679 360 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 SELENBP1Q13228 472 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 SKP2Q13309 424 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 QPRTQ15274 297 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 TOMM34Q15785 309 aaPredicted RBP13.45□□□□□ -0.26
TDP2-205ENST00000480495 NDUFAF6Q330K2 333 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 ZNF610Q8N9Z0 462 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 RFWD2Q8NHY2 731 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 ST8SIA1Q92185 356 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 RAB8BQ92930 207 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 CPNE4Q96A23 557 aaPredicted RBP13.45□□□□□ -0.26
TDP2-205ENST00000480495 REXO5Q96IC2 774 aaKnown RBP13.45□□□□□ -0.26
TDP2-205ENST00000480495 PLSCR4Q9NRQ2 329 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 ST6GALNAC2Q9UJ37 374 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 LIPT1Q9Y234 373 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 SLC35A3Q9Y2D2 325 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 TESMINQ9Y4I5 508 aa13.45□□□□□ -0.26
TDP2-205ENST00000480495 C16orf97H3BN30 126 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 EFNA2O43921 213 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 PGCP20142 388 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 UGT2B10P36537 528 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 MAGEA8P43361 318 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 ART1P52961 327 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 IST1P53990 364 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 HPCAP84074 193 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 ZNF239Q16600 458 aaKnown RBP13.44□□□□□ -0.26
TDP2-205ENST00000480495 TMEM176BQ3YBM2 270 aaPredicted RBP13.44□□□□□ -0.26
TDP2-205ENST00000480495 SLC9B1Q4ZJI4 515 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 GPAT3Q53EU6 434 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 TYW3Q6IPR3 259 aaKnown RBP13.44□□□□□ -0.26
TDP2-205ENST00000480495 FRRS1Q6ZNA5 592 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 ZNF621Q6ZSS3 439 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 RNF130Q86XS8 419 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 ZNF619Q8N2I2 560 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 TMEM234Q8WY98 164 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 TRNT1Q96Q11 434 aaKnown RBP13.44□□□□□ -0.26
TDP2-205ENST00000480495 THUMPD3Q9BV44 507 aaKnown RBP13.44□□□□□ -0.26
TDP2-205ENST00000480495 FANCFQ9NPI8 374 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 SDR39U1Q9NRG7 319 aaPredicted RBP13.44□□□□□ -0.26
TDP2-205ENST00000480495 CLEC4AQ9UMR7 237 aa13.44□□□□□ -0.26
TDP2-205ENST00000480495 CENPVL1A0A0U1RR11 272 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 C9JVG2 144 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 HMGN4O00479 90 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 RFXANKO14593 260 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 UBDO15205 165 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 CYP7B1O75881 506 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 KRT75O95678 551 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 HRGP04196 525 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 UBTFL6P0CB48 400 aaPredicted RBP13.43□□□□□ -0.26
TDP2-205ENST00000480495 NID1P14543 1247 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 DNASE1P24855 282 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 SHC1P29353 583 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 SLC7A1P30825 629 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 FUT5Q11128 374 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 RNPS1Q15287 305 aaKnown RBP13.43□□□□□ -0.26
TDP2-205ENST00000480495 MAPK14Q16539 360 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 C3orf33Q6P1S2 294 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 MSANTD1Q6ZTZ1 278 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 OLIG3Q7RTU3 272 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 MAVSQ7Z434 540 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 FAM71CQ8NEG0 241 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 RNF128Q8TEB7 428 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 ZFP90Q8TF47 636 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 PMM1Q92871 262 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 C7orf26Q96N11 449 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 WFIKKN1Q96NZ8 548 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 FOXC2Q99958 501 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 INPP5KQ9BT40 448 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 MED18Q9BUE0 208 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 LIME1Q9H400 295 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 GP6Q9HCN6 339 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 SERINC1Q9NRX5 453 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.43□□□□□ -0.26
TDP2-205ENST00000480495 CCM2LQ9NUG4 571 aaPredicted RBP13.43□□□□□ -0.26
TDP2-205ENST00000480495 ACER3Q9NUN7 267 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 ZNF226Q9NYT6 803 aa13.43□□□□□ -0.26
TDP2-205ENST00000480495 DIAPH2O60879 1101 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 TGDSO95455 350 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 H6PDO95479 791 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 GSNP06396 782 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 CCKARP32238 428 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 PGM1P36871 562 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 CDKN2CP42773 168 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 SESN3P58005 492 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 RAC3P60763 192 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 CHRNEQ04844 493 aa13.42□□□□□ -0.26
TDP2-205ENST00000480495 TIGD2Q4W5G0 525 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms