RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 WIPI1Q5MNZ9 446 aaPredicted RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 CBLN3Q6UW01 205 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 ZNF836Q6ZNA1 936 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 EIF3MQ7L2H7 374 aaKnown RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 NET1Q7Z628 596 aaPredicted RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 ARPINQ7Z6K5 226 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 CD163Q86VB7 1156 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 CALHM3Q86XJ0 350 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 PEX5LQ8IYB4 626 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 DEFB107AQ8IZN7 70 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 FAM109AQ8N4B1 249 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 HIPK4Q8NE63 616 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 OR2T12Q8NG77 320 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 OR2M3Q8NG83 312 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 OR5M1Q8NGP8 315 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 OR14L1PQ8NHC6 308 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 B4GALNT2Q8NHY0 566 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 BBS10Q8TAM1 723 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 CA5BP1Q8WTZ4 195 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 WDR60Q8WVS4 1066 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 CDRT15Q96T59 188 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 SLC6A15Q9H2J7 730 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 LDAHQ9H6V9 325 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 EXO5Q9H790 373 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 CACYBPQ9HB71 228 aaKnown RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 RLIMQ9NVW2 624 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 DKKL1Q9UK85 242 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 RNF6Q9Y252 685 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 VDAC3Q9Y277 283 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 ZNF443Q9Y2A4 671 aaPredicted RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 SLC6A5Q9Y345 797 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 DSPPQ9NZW4 1301 aa8.21□□□□□ -1.1
VCP-206ENST00000480327 ANKHD1Q8IWZ3 2542 aaKnown RBP8.21□□□□□ -1.1
VCP-206ENST00000480327 ELOVL7A1L3X0 281 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 FAM220BPB1ANY3 271 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 SHISA8B8ZZ34 492 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 M0QX08 132 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 GSTA4O15217 222 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 ZNF264O43296 627 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 GCM2O75603 506 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 TPOP07202 933 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 GUSBP08236 651 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PABPC4LP0CB38 370 aaKnown RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 HK1P19367 917 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 TCN1P20061 433 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 RPS4Y1P22090 263 aaKnown RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 DPP4P27487 766 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 MSX1P28360 303 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 RYKP34925 604 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PCGF2P35227 344 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PTGS2P35354 604 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 MSX2P35548 267 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 GSK3BP49841 420 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 KCNJ10P78508 379 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PLAURQ03405 335 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 HYAL4Q2M3T9 481 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 LIN52Q52LA3 116 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 MRPL2Q5T653 305 aaKnown RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 PRAMEF8Q5VWM4 474 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PRAMEF7Q5VXH5 474 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 ARSKQ6UWY0 536 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 C16orf89Q6UX73 402 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 LSRQ86X29 649 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 KRT73Q86Y46 540 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 CCDC71Q8IV32 467 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 DMRTC2Q8IXT2 367 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 MICU2Q8IYU8 434 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PGAM4Q8N0Y7 254 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 CLIP4Q8N3C7 705 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 METTL25Q8N6Q8 603 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 FADS6Q8N9I5 356 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 SMYD1Q8NB12 490 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 FAM156AQ8NDB6 213 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 RBM15BQ8NDT2 890 aaKnown RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 FAM83FQ8NEG4 500 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 LILRB4Q8NHJ6 448 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 FIG4Q92562 907 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 CNOT9Q92600 299 aaKnown RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 REXO5Q96IC2 774 aaKnown RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 ZNF607Q96SK3 696 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 KCTD14Q9BQ13 255 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 UBQLN3Q9H347 655 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 ALG2Q9H553 416 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 PTGES2Q9H7Z7 377 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 ZDHHC11Q9H8X9 412 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 BCL2L10Q9HD36 194 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 SPAG4Q9NPE6 437 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 TAS2R10Q9NYW0 307 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 TMEM181Q9P2C4 612 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 ZNF232Q9UNY5 417 aa8.2□□□□□ -1.1
VCP-206ENST00000480327 GPC6Q9Y625 555 aaPredicted RBP8.2□□□□□ -1.1
VCP-206ENST00000480327 HEATR5AQ86XA9 2040 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 TRGV5A0A0B4J1U4 118 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 PRORSD1PA6NEY8 169 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 FAM90A27PA6NNH2 459 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 FRS3O43559 492 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 ZIC3O60481 467 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 TPST1O60507 370 aa8.19□□□□□ -1.1
VCP-206ENST00000480327 EIF4E2O60573 245 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms