RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 GATSQ8NAP1 163 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 ATP6V1C2Q8NEY4 427 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 FAM45AQ8TCE6 357 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 ZNF675Q8TD23 568 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 ANKRD49Q8WVL7 239 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 CNRIP1Q96F85 164 aaPredicted RBP10.18□□□□□ -0.78
USP11-208ENST00000480104 SH3YL1Q96HL8 342 aaPredicted RBP10.18□□□□□ -0.78
USP11-208ENST00000480104 OXSMQ9NWU1 459 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 PCDHGB5Q9Y5G0 923 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 PCDHA9Q9Y5H5 950 aa10.18□□□□□ -0.78
USP11-208ENST00000480104 MDFIC2A0A1B0GVS7 189 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 A0A1W2PNR3 127 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 GJE1A6NN92 205 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 HOXA3O43365 443 aaPredicted RBP10.17□□□□□ -0.78
USP11-208ENST00000480104 IGHV2-5P01817 119 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 TCN1P20061 433 aaPredicted RBP10.17□□□□□ -0.78
USP11-208ENST00000480104 RAC3P60763 192 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 LCN2P80188 198 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 NAAAQ02083 359 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 MVKQ03426 396 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 HGFACQ04756 655 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 SLC18A2Q05940 514 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 CUL3Q13618 768 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 PDCD1Q15116 288 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 DECR1Q16698 335 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 GRAMD1BQ3KR37 738 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 CYP27C1Q4G0S4 372 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 SULT1C3Q6IMI6 304 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 FIP1L1Q6UN15 594 aaKnown RBP10.17□□□□□ -0.78
USP11-208ENST00000480104 C4orf22Q6V702 233 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 MYLK4Q86YV6 388 aaPredicted RBP10.17□□□□□ -0.78
USP11-208ENST00000480104 LRRC57Q8N9N7 239 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 DEFB108BQ8NET1 73 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 NUP37Q8NFH4 326 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 OR9A2Q8NGT5 310 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 ACTRT2Q8TDY3 377 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 KTI12Q96EK9 354 aaPredicted RBP10.17□□□□□ -0.78
USP11-208ENST00000480104 ZNF681Q96N22 645 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 ZNF416Q9BWM5 594 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 SEC61A2Q9H9S3 476 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 TNFRSF19Q9NS68 423 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 EMC3Q9P0I2 261 aa10.17□□□□□ -0.78
USP11-208ENST00000480104 NOSIPQ9Y314 301 aaKnown RBP10.17□□□□□ -0.78
USP11-208ENST00000480104 K7EIL1 84 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 ZNF195O14628 629 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 PIP5K1BO14986 540 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 NCR1O76036 304 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 KLK1P06870 262 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 LINGO3P0C6S8 592 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 SLC7A1P30825 629 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 NTF4P34130 210 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 MTNR1AP48039 350 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 ATP4BP51164 291 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 HIKESHIQ53FT3 197 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 TREML1Q86YW5 311 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 TXLNBQ8N3L3 684 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 UBL4BQ8N7F7 174 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 OR4F15Q8NGB8 312 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 ERP27Q96DN0 273 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 ANKRD27Q96NW4 1050 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 MS4A7Q9GZW8 240 aaPredicted RBP10.16□□□□□ -0.78
USP11-208ENST00000480104 DCTN4Q9UJW0 460 aa10.16□□□□□ -0.78
USP11-208ENST00000480104 IGKV3D-15A0A087WSY6 115 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 LCE6AA0A183 80 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 C1orf226A1L170 272 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 ERLIN1O75477 346 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 CECR9P0C854 216 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 TIA1P31483 386 aaKnown RBP eCLIP10.15□□□□□ -0.78
USP11-208ENST00000480104 EIF1P41567 113 aaKnown RBP10.15□□□□□ -0.78
USP11-208ENST00000480104 PRIM2P49643 509 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 PHEXP78562 749 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 POU3F1Q03052 451 aaPredicted RBP10.15□□□□□ -0.78
USP11-208ENST00000480104 CRYMQ14894 314 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 ABLIM2Q6H8Q1 611 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 ZNF771Q7L3S4 317 aaPredicted RBP10.15□□□□□ -0.78
USP11-208ENST00000480104 CNTN4Q8IWV2 1026 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 ZNF527Q8NB42 609 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 OR7G2Q8NG99 324 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 SLC30A2Q9BRI3 323 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 PFDN4Q9NQP4 134 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 IFNKQ9P0W0 207 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 REV1Q9UBZ9 1251 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 ZNF780BQ9Y6R6 833 aa10.15□□□□□ -0.78
USP11-208ENST00000480104 IGHV3OR16-10A0A075B7F0 116 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 VSTM5A8MXK1 200 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 ALG1L2C9J202 215 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 M0R233 179 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 DHHO43323 396 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 SYNGR3O43761 229 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 IGKV1D-16P01601 117 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 MLNP12872 115 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 GP5P40197 560 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 MAGEA6P43360 314 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 PIK3CGP48736 1102 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 MAPK12P53778 367 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 MRPS11P82912 194 aaKnown RBP10.14□□□□□ -0.79
USP11-208ENST00000480104 TGFBR3Q03167 851 aa10.14□□□□□ -0.79
USP11-208ENST00000480104 CD69Q07108 199 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms