RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MRGPRX4Q96LA9 322 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 ADAM19Q9H013 955 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 NTMQ9P121 344 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 SLC25A15Q9Y619 301 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 ATP23Q9Y6H3 246 aa14.16□□□□□ -0.14
DDX56-210ENST00000479440 CCT8L1PA6NM43 557 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 SMAD9O15198 467 aaKnown RBP14.15□□□□□ -0.14
DDX56-210ENST00000479440 LY6HO94772 140 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 TGFAP01135 160 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 SBK3P0C264 359 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 PRKCAP17252 672 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 ITGA2P17301 1181 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 ATP6V1C1P21283 382 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 CFPP27918 469 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 PHC1P78364 1004 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 CHRNEQ04844 493 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 DUSP5Q16690 384 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 IQCCQ4KMZ1 466 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 CCNJQ5T5M9 372 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 FBXW9Q5XUX1 488 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 ZCCHC12Q6PEW1 402 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 SLC16A11Q8NCK7 471 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 PAFAH2Q99487 392 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 TAS2R16Q9NYV7 291 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 TIMM22Q9Y584 194 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 SVEP1Q4LDE5 3571 aa14.15□□□□□ -0.14
DDX56-210ENST00000479440 YLPM1P49750 1951 aaKnown RBP14.14□□□□□ -0.15
DDX56-210ENST00000479440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.14□□□□□ -0.156e-11■■■□□ 17.5
DDX56-210ENST00000479440 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 IGHV4-61A0A0C4DH41 118 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 A0A1W2PNR3 127 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 EFNA2O43921 213 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 RSL1D1O76021 490 aaKnown RBP14.14□□□□□ -0.15
DDX56-210ENST00000479440 EDNRAP25101 427 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 APOBEC3AP31941 199 aaPredicted RBP14.14□□□□□ -0.15
DDX56-210ENST00000479440 SRP14P37108 136 aaKnown RBP14.14□□□□□ -0.15
DDX56-210ENST00000479440 POU6F2P78424 691 aaPredicted RBP14.14□□□□□ -0.15
DDX56-210ENST00000479440 TRADDQ15628 312 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 CARTPTQ16568 116 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 OR7E24Q6IFN5 339 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 SLC22A9Q8IVM8 553 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 TMEM151AQ8N4L1 468 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 ZNF540Q8NDQ6 660 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 GIMAP5Q96F15 307 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 ZNF764Q96H86 408 aaPredicted RBP14.14□□□□□ -0.15
DDX56-210ENST00000479440 OR5B2Q96R09 309 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 KCNA7Q96RP8 456 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 ICAM5Q9UMF0 924 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 CARD8Q9Y2G2 431 aa14.14□□□□□ -0.15
DDX56-210ENST00000479440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.14□□□□□ -0.15
DDX56-210ENST00000479440 LOC390937A0A1W2PQ73 354 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 C9JVG2 144 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 ZNF23P17027 643 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 IMPDH1P20839 514 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 SNRPD2P62316 118 aaKnown RBP14.13□□□□□ -0.15
DDX56-210ENST00000479440 CSNK2A1P68400 391 aaPredicted RBP14.13□□□□□ -0.15
DDX56-210ENST00000479440 ABLIM2Q6H8Q1 611 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 NOXRED1Q6NXP6 359 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 BHLHB9Q6PI77 547 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 CBLN3Q6UW01 205 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 TMCO5AQ8N6Q1 288 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 TOR1AIP2Q8NFQ8 470 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 ZNF75CPQ92670 426 aaPredicted RBP14.13□□□□□ -0.15
DDX56-210ENST00000479440 APH1AQ96BI3 265 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 ZNF775Q96BV0 537 aaPredicted RBP14.13□□□□□ -0.15
DDX56-210ENST00000479440 CHMP6Q96FZ7 201 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 BTBD2Q9BX70 525 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 HOXD1Q9GZZ0 328 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 ASB6Q9NWX5 421 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 NINJ2Q9NZG7 142 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 NOSIPQ9Y314 301 aaKnown RBP14.13□□□□□ -0.15
DDX56-210ENST00000479440 TRAF6Q9Y4K3 522 aa14.13□□□□□ -0.15
DDX56-210ENST00000479440 A0A1W2PR80 420 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 TRIM49D1C9J1S8 452 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 GTPBP1O00178 669 aaKnown RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 IGHV3-9P01782 118 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 ATP5F1P24539 256 aaPredicted RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 CBFBQ13951 182 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 MLC1Q15049 377 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 TOMM34Q15785 309 aaPredicted RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 SLC25A53Q5H9E4 307 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 C17orf78Q8N4C9 275 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 GPR119Q8TDV5 335 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 CIDECQ96AQ7 238 aaPredicted RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 PPCDCQ96CD2 204 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 ZHX1-C8orf76Q96EF9 292 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 L3HYPDHQ96EM0 354 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 OTUB1Q96FW1 271 aaPredicted RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 C1orf159Q96HA4 380 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 SORCS2Q96PQ0 1159 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 STACQ99469 402 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 FUT8Q9BYC5 575 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 MID1IP1Q9NPA3 183 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 RRAGDQ9NQL2 400 aaPredicted RBP14.12□□□□□ -0.15
DDX56-210ENST00000479440 DUSP22Q9NRW4 184 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 GIN1Q9NXP7 522 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 MALT1Q9UDY8 824 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 ZNF180Q9UJW8 692 aa14.12□□□□□ -0.15
DDX56-210ENST00000479440 AMDHD2Q9Y303 409 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms