RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 CLIP4Q8N3C7 705 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 ZNF563Q8TA94 476 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 SLC26A7Q8TE54 656 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 SMPDL3BQ92485 455 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 ZBTB8AQ96BR9 441 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 TIMP4Q99727 224 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 PIGQQ9BRB3 760 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 PNPLA3Q9NST1 481 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 DNAJB12Q9NXW2 375 aaKnown RBP13.77□□□□□ -0.21
COL16A1-211ENST00000479100 TINAGQ9UJW2 476 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 SLC13A4Q9UKG4 626 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 TEX15Q9BXT5 2789 aa13.77□□□□□ -0.21
COL16A1-211ENST00000479100 ELOVL7A1L3X0 281 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 CDHR4A6H8M9 788 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 PRORSD1PA6NEY8 169 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 CFAP73A6NFT4 308 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 H3BML4 177 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 ACTL6AO96019 429 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 OPN1SWP03999 348 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 LINGO3P0C6S8 592 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 GKN3PP0CG01 181 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 POU3F2P20265 443 aaPredicted RBP13.76□□□□□ -0.21
COL16A1-211ENST00000479100 SLC6A8P48029 635 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 GSK3BP49841 420 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 GFRA1P56159 465 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 B3GALT5-AS1P59052 145 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 SRYQ05066 204 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 CRYZQ08257 329 aaKnown RBP13.76□□□□□ -0.21
COL16A1-211ENST00000479100 FOXF1Q12946 379 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 ZSWIM7Q19AV6 140 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 DCST1Q5T197 706 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 RNF220Q5VTB9 566 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 VASNQ6EMK4 673 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 ENPP6Q6UWR7 440 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 C16orf89Q6UX73 402 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 PATL1Q86TB9 770 aaKnown RBP13.76□□□□□ -0.21
COL16A1-211ENST00000479100 DOLPP1Q86YN1 238 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 DEFB107AQ8IZN7 70 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 SMYD1Q8NB12 490 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 FAM71CQ8NEG0 241 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 RNF145Q96MT1 663 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 NPAS1Q99742 590 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 KCTD14Q9BQ13 255 aaPredicted RBP13.76□□□□□ -0.21
COL16A1-211ENST00000479100 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 EXOSC3Q9NQT5 275 aaKnown RBP13.76□□□□□ -0.21
COL16A1-211ENST00000479100 NDE1Q9NXR1 346 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 PACSIN3Q9UKS6 424 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 ZNF337Q9Y3M9 751 aa13.76□□□□□ -0.21
COL16A1-211ENST00000479100 DNAJC13O75165 2243 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 PCNX3Q9H6A9 2034 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 A1L4Q6 167 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 AP3D1O14617 1153 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 LRRTM2O43300 516 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 FRS3O43559 492 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 TPST1O60507 370 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 GCM2O75603 506 aaPredicted RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 CLDN1O95832 211 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 STSP08842 583 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 UQCRBP14927 111 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 CALB2P22676 271 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 CHMP24386 653 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 PRKAR1BP31321 381 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 IDH2P48735 452 aaKnown RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 PCBP3P57721 371 aaKnown RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 EEFSECP57772 596 aaKnown RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 CBX1P83916 185 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 PLAURQ03405 335 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 LRRC23Q53EV4 343 aaPredicted RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 NHSL2Q5HYW2 709 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 POMZP3Q6PJE2 187 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 DHRS4L2Q6PKH6 230 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 Q6ZPB1 254 aaPredicted RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 FJX1Q86VR8 437 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 ZNF440Q8IYI8 595 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 PGAM4Q8N0Y7 254 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
COL16A1-211ENST00000479100 RNF148Q8N7C7 305 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 ATP6V1C2Q8NEY4 427 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 POC1BQ8TC44 478 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 RELTQ969Z4 430 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 ALG2Q9H553 416 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 KLHL28Q9NXS3 571 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 TMEM181Q9P2C4 612 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 SLC5A6Q9Y289 635 aa13.75□□□□□ -0.21
COL16A1-211ENST00000479100 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 H0Y3Z8 333 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 CCL21O00585 134 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 SEC14L5O43304 696 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 UBOX5O94941 541 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 MFN2O95140 757 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 OPN1LWP04000 364 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 PEPDP12955 493 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 PRG2P13727 222 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 ZNF17P17021 662 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 PRKCAP17252 672 aa13.74□□□□□ -0.21
COL16A1-211ENST00000479100 EIF1P41567 113 aaKnown RBP13.74□□□□□ -0.21
COL16A1-211ENST00000479100 CA7P43166 264 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms