RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZDHHC20Q5W0Z9 365 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 TSSK4Q6SA08 328 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 LBX2Q6XYB7 198 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 CERS6Q6ZMG9 384 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 C17orf47Q8NEP4 570 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 OR5W2Q8NH69 310 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 SMAP2Q8WU79 429 aaPredicted RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 RFKQ969G6 155 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 ALG8Q9BVK2 526 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 RNF122Q9H9V4 155 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 EXOGQ9Y2C4 368 aaKnown RBP19.76■□□□□ 0.75
SDF4-206ENST00000478938 PLEKHA6Q9Y2H5 1048 aa19.76■□□□□ 0.75
SDF4-206ENST00000478938 TRAV14DV4A0A0A6YYC5 116 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 SERTM1A2A2V5 107 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 NAP1L6A6NFF2 107 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 DBX1A6NMT0 343 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ITGA10O75578 1167 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ATP1B1P05026 303 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 SAGP10523 405 aaPredicted RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 ACVR1BP36896 505 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 IL10RAQ13651 578 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 NDUFA9Q16795 377 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ARSIQ5FYB1 569 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ENTPD8Q5MY95 495 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 CXXC5Q7LFL8 322 aaKnown RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 ZNF546Q86UE3 836 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ZC3H10Q96K80 434 aaKnown RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 TIMP4Q99727 224 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 RSRP1Q9BUV0 290 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 TREM2Q9NZC2 230 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 CNIH4Q9P003 139 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 METTL1Q9UBP6 276 aaKnown RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 ACAD8Q9UKU7 415 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 NDUFB6O95139 128 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 CR2P20023 1033 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 EIF2S3P41091 472 aaKnown RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 STAT5AP42229 794 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 NSG1P42857 185 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 PLEKHN1Q494U1 663 aaPredicted RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 RPTNQ6XPR3 784 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 TMEM99Q8N816 258 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ZNF671Q8TAW3 534 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ING5Q8WYH8 240 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 C16orf70Q9BSU1 422 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 ZNF471Q9BX82 626 aaPredicted RBP19.75■□□□□ 0.75
SDF4-206ENST00000478938 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.75■□□□□ 0.755e-6■□□□□ 11
SDF4-206ENST00000478938 OR51I1Q9H343 314 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 REEP4Q9H6H4 257 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 IL20RAQ9UHF4 553 aa19.75■□□□□ 0.75
SDF4-206ENST00000478938 METTL21EPA6NDL7 271 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 CASTOR2A6NHX0 329 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 FAM183AA6NL82 134 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 C19orf81C9J6K1 198 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 NEDD8-MDP1E9PL57 170 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 EPXP11678 715 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 NQO2P16083 231 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 YBEYP58557 167 aaPredicted RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 TWF1Q12792 350 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 TUSC3Q13454 348 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 TIGD5Q53EQ6 642 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 C1orf94Q6P1W5 598 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 MUC20Q8N307 709 aaPredicted RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 MORN4Q8NDC4 146 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 CPNE2Q96FN4 548 aaPredicted RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 C14orf144Q96I85 54 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 SPATC1LQ9H0A9 340 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 PLEKHA1Q9HB21 404 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 TREM1Q9NP99 234 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 POLE3Q9NRF9 147 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 DZANK1Q9NVP4 752 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 TNFRSF10BO14763 440 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 STX11O75558 287 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 KRT33AO76009 404 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 SERPIND1P05546 499 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 OR8U8P0C7N1 319 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 HTR2AP28223 471 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 HCCSP53701 268 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 SMIM11AP58511 58 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 SEMG2Q02383 582 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 KRT33BQ14525 404 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 PON3Q15166 354 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 JMJD6Q6NYC1 403 aaPredicted RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 SERPINA13PQ6UXR4 307 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 SCN4BQ8IWT1 228 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 KLHDC9Q8NEP7 349 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 OR6K2Q8NGY2 324 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 OR4Q3Q8NH05 313 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 C14orf79Q96F83 325 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 MEGF10Q96KG7 1140 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 ZNF354BQ96LW1 612 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 TMEM68Q96MH6 324 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 NAA11Q9BSU3 229 aaPredicted RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 GGACTQ9BVM4 153 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 C8orf33Q9H7E9 229 aaPredicted RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 TMEM138Q9NPI0 162 aa19.74■□□□□ 0.75
SDF4-206ENST00000478938 MRPL17Q9NRX2 175 aaKnown RBP19.74■□□□□ 0.75
SDF4-206ENST00000478938 A0A1W2PRQ8 180 aa19.73■□□□□ 0.75
SDF4-206ENST00000478938 TERTO14746 1132 aaKnown RBP19.73■□□□□ 0.75
SDF4-206ENST00000478938 FARS2O95363 451 aaKnown RBP19.73■□□□□ 0.75
SDF4-206ENST00000478938 RLN1P04808 185 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms