RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 IKZF5Q9H5V7 419 aa13.26□□□□□ -0.29
NPHP4-208ENST00000478423 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 A0A1B0GTW7 788 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 C13orf42A0A1B0GVH6 325 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SULT2B1O00204 365 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 IFNA21P01568 189 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ERCC1P07992 297 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 NKX3-2P78367 333 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SRYQ05066 204 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SMAD2Q15796 467 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 XKRXQ6PP77 449 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 LAS2Q8IYD9 372 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 OR8H3Q8N146 312 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ARL14Q8N4G2 192 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 NIPSNAP1Q9BPW8 284 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 URM1Q9BTM9 101 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 OR10A5Q9H207 317 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 UBE2ZQ9H832 354 aaPredicted RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 NT5DC2Q9H857 520 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 NLKQ9UBE8 527 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 AK6Q9Y3D8 172 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 TRBV11-1A0A0K0K1C0 115 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 BLACEA4D250 179 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SLC35E2P0CK97 266 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 PIGAP37287 484 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 PSMB10P40306 273 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 CTBP2P56545 445 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 DCAF7P61962 342 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 OCLNQ16625 522 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 HES5Q5TA89 166 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 THOC7Q6I9Y2 204 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF584Q8IVC4 421 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 IL17RCQ8NAC3 791 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 CCDC54Q8NEL0 328 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 POTEKPQ9BYX7 375 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 INIPQ9NRY2 104 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 TBCCD1Q9NVR7 557 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 DAPP1Q9UN19 280 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 A0A1W2PR48 441 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 CENPBD1B2RD01 187 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SYT5O00445 386 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 F13BP05160 661 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 OPRD1P41143 372 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 GLP1RP43220 463 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 NTRK2Q16620 822 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SPIN3Q5JUX0 258 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ANKRD13BQ86YJ7 626 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 OR13C3Q8NGS6 347 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ALG14Q96F25 216 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 DISC1C4P0D8 188 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 LCMT2O60294 686 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SLC16A7O60669 478 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 CTNSO60931 367 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ETHE1O95571 254 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ART1P52961 327 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 PHC1P78364 1004 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 DHRS1Q96LJ7 313 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 AMBRA1Q9C0C7 1298 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 A4GALTQ9NPC4 353 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 FANCFQ9NPI8 374 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 NUDT15Q9NV35 164 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 SIDT1Q9NXL6 827 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF224Q9NZL3 707 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 MRPL15Q9P015 296 aaKnown RBP13.25□□□□□ -0.29
NPHP4-208ENST00000478423 PISDQ9UG56 409 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF337Q9Y3M9 751 aa13.25□□□□□ -0.29
NPHP4-208ENST00000478423 POU3F4P49335 361 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ILKQ13418 452 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 TMPPEQ6ZT21 453 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 KCTD9Q7L273 389 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 GALNT6Q8NCL4 622 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 OR5T2Q8NGG2 359 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 TMEM165Q9HC07 324 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 SLC7A11Q9UPY5 501 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ARID1AO14497 2285 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 CER1O95813 267 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 APOC1P02654 83 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 CLUP10909 449 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 PSMA6P60900 246 aaKnown RBP13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ACSM3Q53FZ2 586 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 PIAS4Q8N2W9 510 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-208ENST00000478423 FRMD1Q8N878 549 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 DUSP19Q8WTR2 217 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 UBE2FQ969M7 185 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 SENP5Q96HI0 755 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-208ENST00000478423 BABAM2Q9NXR7 383 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 DLEC1Q9Y238 1755 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 OR2AT4A6NND4 320 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF28P17035 718 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ELAVL4P26378 380 aaKnown RBP13.24□□□□□ -0.29
NPHP4-208ENST00000478423 EPHA5P54756 1037 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 HTRA4P83105 476 aaPredicted RBP13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF385BQ569K4 471 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 AGBL4Q5VU57 503 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 MEPCEQ7L2J0 689 aaKnown RBP13.24□□□□□ -0.29
NPHP4-208ENST00000478423 GPR148Q8TDV2 347 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 C4orf36Q96KX1 117 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 LMF1Q96S06 567 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 INTS14Q96SY0 518 aa13.24□□□□□ -0.29
NPHP4-208ENST00000478423 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms