RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 DHCR7Q9UBM7 475 aaKnown RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 APPL1Q9UKG1 709 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 KLHDC2Q9Y2U9 406 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 EXOSC1Q9Y3B2 195 aaKnown RBP-0.31□□□□□ -2.46
CALD1-218ENST00000478075 TICRRQ7Z2Z1 1910 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 CR1P17927 2039 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 CCDC88CQ9P219 2028 aa-0.31□□□□□ -2.46
CALD1-218ENST00000478075 RPAP1Q9BWH6 1393 aaPredicted RBP-0.32□□□□□ -2.46
CALD1-218ENST00000478075 MUC12Q9UKN1 5478 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 SYNE1Q8NF91 8797 aaKnown RBP-0.32□□□□□ -2.46
CALD1-218ENST00000478075 ANKRD12Q6UB98 2062 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 ANKRD18BA2A2Z9 1011 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 ADCY5O95622 1261 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 JCHAINP01591 159 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 ANGP03950 147 aaKnown RBP-0.32□□□□□ -2.46
CALD1-218ENST00000478075 RLN1P04808 185 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 SERPINF2P08697 491 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 SOAT1P35610 550 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 IFI35P80217 286 aaPredicted RBP-0.32□□□□□ -2.46
CALD1-218ENST00000478075 SLC10A7Q0GE19 358 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 SYCNQ0VAF6 134 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 IHHQ14623 411 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 PARP10Q53GL7 1025 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 LRRC38Q5VT99 294 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 CTRB2Q6GPI1 263 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 CCDC70Q6NSX1 233 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 HACD2Q6Y1H2 254 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 ASPGQ86U10 573 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 TMEM25Q86YD3 366 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 LRRC52Q8N7C0 313 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 OR51S1Q8NGJ8 323 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 MCOLN3Q8TDD5 553 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 TRUB1Q8WWH5 349 aaKnown RBP-0.32□□□□□ -2.46
CALD1-218ENST00000478075 HAS2Q92819 552 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 DNASE1L2Q92874 299 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 FRMD8P1Q9BZ68 369 aaPredicted RBP-0.32□□□□□ -2.46
CALD1-218ENST00000478075 ST6GALNAC4Q9H4F1 302 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 PRR14LQ5THK1 2151 aa-0.32□□□□□ -2.46
CALD1-218ENST00000478075 THADAQ6YHU6 1953 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 IGHV3OR16-8A0A075B7F1 116 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 IGHV5-51A0A0C4DH38 117 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 A0A1B0GUL7 405 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 A0A1B0GVX0 72 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 C3orf84H3BNL1 204 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 ATP9AO75110 1047 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 GGPS1O95749 300 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 GAS8O95995 478 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 P04436 131 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 ALPPP05187 535 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 CCDC175P0C221 793 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 ZNF250P15622 560 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 OMGP23515 440 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 SLC26A3P40879 764 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 SGSHP51688 502 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 PLK1P53350 603 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 ESRRGP62508 458 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 PLD1Q13393 1074 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 KARSQ15046 597 aaKnown RBP-0.33□□□□□ -2.46
CALD1-218ENST00000478075 PVRIGQ6DKI7 326 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 ITPRIPL1Q6GPH6 555 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 CWC27Q6UX04 472 aaKnown RBP-0.33□□□□□ -2.46
CALD1-218ENST00000478075 LYPD2Q6UXB3 125 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 FAM92BQ6ZTR7 304 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 SLC22A16Q86VW1 577 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 SNX32Q86XE0 403 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 AQP12AQ8IXF9 295 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 NRMQ8IXM6 262 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 OR10G9Q8NGN4 311 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 P3H4Q92791 437 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 CDKN2AIPNLQ96HQ2 116 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 MCHR1Q99705 422 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 ACPTQ9BZG2 426 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 FAM114A2Q9NRY5 505 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 KIF25Q9UIL4 384 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 USP16Q9Y5T5 823 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 PLEKHH1Q9ULM0 1364 aa-0.33□□□□□ -2.46
CALD1-218ENST00000478075 MN1Q10571 1320 aaPredicted RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 CENPJQ9HC77 1338 aaPredicted RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 IGHV3OR16-13A0A075B7E8 117 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 IGHV3-66A0A0C4DH42 116 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 A0A0G2JRQ6 117 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 IDSB3KWA1 339 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 CHEK1O14757 476 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 PPIHO43447 177 aaKnown RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 TRIM3O75382 744 aaPredicted RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 CHRNGP07510 517 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 NMT1P30419 496 aaKnown RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 EPHX2P34913 555 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 RPL8P62917 257 aaKnown RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 HMGCS1Q01581 520 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 CCDC173Q0VFZ6 552 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 SS18Q15532 418 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 EPC2Q52LR7 807 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 KRBOX4Q5JUW0 171 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 C1orf100Q5SVJ3 147 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 ATF7IP2Q5U623 682 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 PODNL1Q6PEZ8 512 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 USP50Q70EL3 339 aaPredicted RBP-0.34□□□□□ -2.46
CALD1-218ENST00000478075 ADM2Q7Z4H4 148 aa-0.34□□□□□ -2.46
CALD1-218ENST00000478075 KRTAP19-3Q7Z4W3 81 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms