RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 KCNE5Q9UJ90 142 aa12.37□□□□□ -0.43
HDAC7-222ENST00000477937 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
HDAC7-222ENST00000477937 MED13LQ71F56 2210 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 C9JVG2 144 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 EFNA2O43921 213 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 SLC22A3O75751 556 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 IL6P05231 212 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 PABPC4LP0CB38 370 aaKnown RBP12.36□□□□□ -0.43
HDAC7-222ENST00000477937 CD1EP15812 388 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 PRKCAP17252 672 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 ANXA11P50995 505 aaKnown RBP12.36□□□□□ -0.43
HDAC7-222ENST00000477937 ART1P52961 327 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 IST1P53990 364 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 TXNL4AP83876 142 aaKnown RBP12.36□□□□□ -0.43
HDAC7-222ENST00000477937 HPCAP84074 193 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 SELENBP1Q13228 472 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 QPRTQ15274 297 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 GSTA3Q16772 222 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 TMEM176BQ3YBM2 270 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-222ENST00000477937 GPAT3Q53EU6 434 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 AP1ARQ63HQ0 302 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF621Q6ZSS3 439 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 OLIG3Q7RTU3 272 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 RNF130Q86XS8 419 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 ATP6V1C2Q8NEY4 427 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 OR6K3Q8NGY3 331 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 CPNE4Q96A23 557 aaPredicted RBP12.36□□□□□ -0.43
HDAC7-222ENST00000477937 THUMPD3Q9BV44 507 aaKnown RBP12.36□□□□□ -0.43
HDAC7-222ENST00000477937 SAP130Q9H0E3 1048 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 LIME1Q9H400 295 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 PLSCR4Q9NRQ2 329 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 CLEC4AQ9UMR7 237 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 SLC35A3Q9Y2D2 325 aa12.36□□□□□ -0.43
HDAC7-222ENST00000477937 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 ABCA4P78363 2273 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 C16orf97H3BN30 126 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 HMGN4O00479 90 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 KIAA0513O60268 411 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 SS18L1O75177 396 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-222ENST00000477937 NTN1O95631 604 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 UBTFL6P0CB48 400 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-222ENST00000477937 PGCP20142 388 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 DNASE1P24855 282 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 SHC1P29353 583 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 UGT2B10P36537 528 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 SKP2Q13309 424 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 SLC9B1Q4ZJI4 515 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 PDCD4Q53EL6 469 aaKnown RBP12.35□□□□□ -0.43
HDAC7-222ENST00000477937 SLC25A53Q5H9E4 307 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 TYW3Q6IPR3 259 aaKnown RBP12.35□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF619Q8N2I2 560 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 TMEM234Q8WY98 164 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 ROBO4Q8WZ75 1007 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 ST8SIA1Q92185 356 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 WFIKKN1Q96NZ8 548 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 INPP5KQ9BT40 448 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 CCM2LQ9NUG4 571 aaPredicted RBP12.35□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF226Q9NYT6 803 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 TESMINQ9Y4I5 508 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 AKAP6Q13023 2319 aa12.35□□□□□ -0.43
HDAC7-222ENST00000477937 CENPVL1A0A0U1RR11 272 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ETV2O00321 342 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-222ENST00000477937 RFXANKO14593 260 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 UBDO15205 165 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 DNAJA2O60884 412 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 H6PDO95479 791 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 KRT75O95678 551 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 HRGP04196 525 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 GSNP06396 782 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 SLC7A1P30825 629 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 CDKN2CP42773 168 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 FUT5Q11128 374 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 RNPS1Q15287 305 aaKnown RBP12.34□□□□□ -0.43
HDAC7-222ENST00000477937 MAPK14Q16539 360 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF239Q16600 458 aaKnown RBP12.34□□□□□ -0.43
HDAC7-222ENST00000477937 TIGD2Q4W5G0 525 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 STK32CQ86UX6 486 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ZFP90Q8TF47 636 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ZNF524Q96C55 264 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ZG16BQ96DA0 208 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 MARK4Q96L34 752 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 TRNT1Q96Q11 434 aaKnown RBP12.34□□□□□ -0.43
HDAC7-222ENST00000477937 MED18Q9BUE0 208 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 KLHL4Q9C0H6 718 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 FANCFQ9NPI8 374 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 SERINC1Q9NRX5 453 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.34□□□□□ -0.43
HDAC7-222ENST00000477937 KLHL28Q9NXS3 571 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 ZIM2Q9NZV7 527 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 USH1CQ9Y6N9 552 aa12.34□□□□□ -0.43
HDAC7-222ENST00000477937 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 DIAPH2O60879 1101 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 ANP32DO95626 131 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 C1QCP02747 245 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 PGM1P36871 562 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 SESN3P58005 492 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 KCNJ10P78508 379 aa12.33□□□□□ -0.44
HDAC7-222ENST00000477937 CHRNEQ04844 493 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms