RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ATOH8Q96SQ7 321 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 CITED1Q99966 193 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 RSRP1Q9BUV0 290 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 RSPO3Q9BXY4 272 aaPredicted RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 RHOJQ9H4E5 214 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 NARFLQ9H6Q4 476 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 ALG9Q9H6U8 611 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 CAB39LQ9H9S4 337 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 ZMAT3Q9HA38 289 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 Q9N2J8 555 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 NPHS2Q9NP85 383 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC17A5Q9NRA2 495 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 C19orf53Q9UNZ5 99 aaPredicted RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 MTO1Q9Y2Z2 717 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 AMDHD2Q9Y303 409 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 TENM3Q9P273 2699 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 PCNX3Q9H6A9 2034 aa6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
SPTLC1-205ENST00000477888 A0A087WV62 115 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 IGHV1-18A0A0C4DH31 117 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 A0A1W2PNR3 127 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 GXYLT2A0PJZ3 443 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 CLDN34H7C241 214 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 J3QLI3 93 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 M0QZ24 198 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 UBXN8O00124 270 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 UPK1AO00322 258 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 PIN1P1O15428 100 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 PLPP2O43688 288 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 OXSR1O95747 527 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ERCC1P07992 297 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 SAGP10523 405 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ANPEPP15144 967 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 COL8A2P25067 703 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 GSTT1P30711 240 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ELK3P41970 407 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 GPR6P46095 362 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 PRIM2P49643 509 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC12A2P55011 1212 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 PRPS1P60891 318 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 MYBPC1Q00872 1141 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 IL1RL1Q01638 556 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 MGAT5Q09328 741 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ZP4Q12836 540 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF155Q12901 538 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 PDK3Q15120 406 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ADRM1Q16186 407 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 GLE1Q53GS7 698 aaKnown RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ELFN2Q5R3F8 820 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 VAX1Q5SQQ9 334 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 HP1BP3Q5SSJ5 553 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 FRG2Q64ET8 278 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 RBMS3Q6XE24 437 aaKnown RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 SAMD14Q8IZD0 417 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 GATSQ8NAP1 163 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 C1orf162Q8NEQ5 155 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 FBXO27Q8NI29 283 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 WFDC12Q8WWY7 111 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF524Q96C55 264 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 CFAP36Q96G28 342 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 SH3YL1Q96HL8 342 aaPredicted RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 FRG2BQ96QU4 278 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 CCT8L2Q96SF2 557 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 RBM4BQ9BQ04 359 aaKnown RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 LMF2Q9BU23 707 aaKnown RBP6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 FAIM2Q9BWQ8 316 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 IPPKQ9H8X2 491 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 PFDN4Q9NQP4 134 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 OPN4Q9UHM6 478 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ZDHHC2Q9UIJ5 367 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ICAM5Q9UMF0 924 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 ANGPTL3Q9Y5C1 460 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 CORINQ9Y5Q5 1042 aa6.32□□□□□ -1.4
SPTLC1-205ENST00000477888 A0A0G2JMP0 313 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 A0A0X1KG70 313 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ZNF716A6NP11 495 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 SUPT3HB4E1H0 165 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 hCG_2039718K7EN88 272 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 KIF2AO00139 706 aaPredicted RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 KLF11O14901 512 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 SCAMP2O15127 329 aaKnown RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 COQ9O75208 318 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 SUPT3HO75486 399 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ADRA2AP08913 450 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 GABRA3P34903 492 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 MPIP34949 423 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 MAP3K8P41279 467 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC1A3P43003 542 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 TMEM33P57088 247 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 POU3F1Q03052 451 aaPredicted RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 DLG1Q12959 904 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 GTF2H2Q13888 395 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 SLC29A2Q14542 456 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 CD226Q15762 336 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ZKSCAN8Q15776 578 aaPredicted RBP6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ASPHD2Q6ICH7 369 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ACSM5Q6NUN0 579 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 GTF2H2CQ6P1K8 395 aa6.31□□□□□ -1.4
SPTLC1-205ENST00000477888 ANKRD16Q6P6B7 361 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms