RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 MATN1P21941 496 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 TLX1P31314 330 aaPredicted RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 SLC1A6P48664 564 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 MRPL19P49406 292 aaKnown RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 TNFSF10P50591 281 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 RPL14P50914 215 aaKnown RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF84P51523 738 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 SLC37A1P57057 533 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 MLF1P58340 268 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 TAS2R50P59544 299 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ID2Q02363 134 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 KLRB1Q12918 225 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 HEPACAMQ14CZ8 416 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 EBPQ15125 230 aaKnown RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 INAQ16352 499 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 NADK2Q4G0N4 442 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF628Q5EBL2 1059 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 FHL5Q5TD97 284 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 MFSD4BQ5TF39 518 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF324BQ6AW86 544 aaPredicted RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 RPUSD3Q6P087 351 aaKnown RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 SCIMPQ6UWF3 145 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF813Q6ZN06 617 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 C9orf40Q8IXQ3 194 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 SLC5A8Q8N695 610 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF321PQ8N8H1 164 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ANKRD42Q8N9B4 389 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 OR4K14Q8NGD5 310 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 PSMA8Q8TAA3 256 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 TM9SF4Q92544 642 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 NCLNQ969V3 563 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 MTERF3Q96E29 417 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 SCMH1Q96GD3 660 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 SENP5Q96HI0 755 aaPredicted RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 EGLN2Q96KS0 407 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 PPP3R2Q96LZ3 170 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 FAIM2Q9BWQ8 316 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 EBPLQ9BY08 206 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ILKAPQ9H0C8 392 aaPredicted RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 WDR41Q9HAD4 459 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 SEPSECSQ9HD40 501 aaKnown RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 SH2D2AQ9NP31 389 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 THAP1Q9NVV9 213 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 MAT2BQ9NZL9 334 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 KLHL13Q9P2N7 655 aa4.79□□□□□ -1.64
VPS45-207ENST00000477558 POLR3HQ9Y535 204 aaPredicted RBP4.79□□□□□ -1.64
VPS45-207ENST00000477558 USP9YO00507 2555 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 DNAJC13O75165 2243 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 TRBV11-1A0A0K0K1C0 115 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ATP6AP2A0A1C7CYW4 349 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ARHGAP10A1A4S6 786 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 WDR91A4D1P6 747 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ASPDHA6ND91 283 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 OR5H15A6NDH6 313 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 A6NL46 340 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 OR6C76A6NM76 312 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 PLOD2O00469 737 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 HDAC3O15379 428 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ATP8B1O43520 1251 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 CRCPO75575 148 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ATP6AP2O75787 350 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ZFAND5O76080 213 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 HSPA4LO95757 839 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 WDPCPO95876 746 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ANXA4P09525 319 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 CT62P0C5K7 136 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 PORP16435 677 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 CSNK2A2P19784 350 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 GPX3P22352 226 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 MAP3K8P41279 467 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 XKP51811 444 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ERVK-8P63133 956 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 RPL38P63173 70 aaKnown RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 EMX2Q04743 252 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 STX4Q12846 297 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 STX3Q13277 289 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 RAPSNQ13702 412 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 CBFBQ13951 182 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 PTGR1Q14914 329 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 LTB4RQ15722 352 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 MEP1AQ16819 746 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 IMPG1Q17R60 797 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ATP6AP1LQ52LC2 224 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 HHATQ5VTY9 493 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 OR4N5Q8IXE1 308 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 GPALPP1Q8IXQ4 340 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 SAMD14Q8IZD0 417 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 BEST3Q8N1M1 668 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 OR2L13Q8N349 312 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 LRRC25Q8N386 305 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 OR7G1Q8NGA0 311 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 OSR1Q8TAX0 266 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 AGR3Q8TD06 166 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 RNF138Q8WVD3 245 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ZNF75CPQ92670 426 aaPredicted RBP4.78□□□□□ -1.64
VPS45-207ENST00000477558 ADIPOR1Q96A54 375 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 ZBTB9Q96C00 473 aa4.78□□□□□ -1.64
VPS45-207ENST00000477558 COQ8BQ96D53 544 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms